RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 GHITMQ9H3K2 345 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 GALR3O60755 368 aaPredicted RBP14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SEMA4FO95754 770 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 NSDHLQ15738 373 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM196Q5HYL7 178 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 LAMTOR1Q6IAA8 161 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 OR13H1Q8NG92 308 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 OR13C3Q8NGS6 347 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 FKRPQ9H9S5 495 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 ENTPD2Q9Y5L3 495 aa14.76□□□□□ -0.05
PCDH1-203ENST00000394536 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 LAMA3Q16787 3333 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 A0A0B4J2E0 115 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 A0A1B0GX12 115 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 HRKO00198 91 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 DCNP07585 359 aaKnown RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF28P17035 718 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 RAB38P57729 211 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 PLCXD2Q0VAA5 305 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 SAV1Q9H4B6 383 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 PLEKHA1Q9HB21 404 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 MCCC2Q9HCC0 563 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 HPF1Q9NWY4 346 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 SLC22A13Q9Y226 551 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 PIAS3Q9Y6X2 628 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 MEIKINA0A087WXM9 373 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF736B4DX44 427 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 DISC1C4P0D8 188 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 NPIPA5E9PKD4 350 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 CCSO14618 274 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 CD53P19397 219 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 CD34P28906 385 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 ARRB1P49407 418 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 P2RX1P51575 399 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 PUDPQ08623 228 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 TOMM20Q15388 145 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 WBP2NLQ6ICG8 309 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 SLC18B1Q6NT16 456 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 GPAT4Q86UL3 456 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 SYS1Q8N2H4 156 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 C12orf45Q8N5I9 185 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 NAXEQ8NCW5 288 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 TSNAXQ99598 290 aaKnown RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 MAP3K3Q99759 626 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 TPSD1Q9BZJ3 242 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 TCEAL2Q9H3H9 227 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 UBQLN4Q9NRR5 601 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 EPHA6Q9UF33 1036 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 NPIPA1Q9UND3 350 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 TRAV1-2A0A0B4J238 106 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 CFDP00746 253 aaPredicted RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 MRPS10P82664 201 aaKnown RBP14.75□□□□□ -0.05
PCDH1-203ENST00000394536 ZBTB44Q8NCP5 570 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 C16orf52Q8NHV5 167 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 FGF14Q92915 247 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 KCNJ15Q99712 375 aa14.75□□□□□ -0.05
PCDH1-203ENST00000394536 CSF1P09603 554 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 PNMTP11086 282 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 PGAM2P15259 253 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 IFNGR1P15260 489 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 OR3A2P47893 321 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 EIF2B1Q14232 305 aaKnown RBP14.74□□□□□ -0.05
PCDH1-203ENST00000394536 GLYATL3Q5SZD4 288 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM185AQ8NFB2 350 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 PTDSS2Q9BVG9 487 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 PLA2G2FQ9BZM2 168 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 KCNE5Q9UJ90 142 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ARHGEF17Q96PE2 2063 aaPredicted RBP14.74□□□□□ -0.05
PCDH1-203ENST00000394536 CTNSO60931 367 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 EFEMP2O95967 443 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 IGFBP4P22692 258 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ACTBP60709 375 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 SEC61A1P61619 476 aaKnown RBP14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ACTG1P63261 375 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 CAMK2DQ13557 499 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ANGPTL6Q8NI99 470 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 METTL8Q9H825 291 aaKnown RBP14.74□□□□□ -0.05
PCDH1-203ENST00000394536 LYRM4Q9HD34 91 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 TEX51A0A1B0GUA7 166 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF264O43296 627 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 CD3DP04234 171 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 H2BFMP0C1H6 154 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ERGP11308 486 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 AKR1C2P52895 323 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 GAS1P54826 345 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 AKR1C1Q04828 323 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ACSM1Q08AH1 577 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM240Q5SV17 173 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 STEAP1BQ6NZ63 245 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 CA13Q8N1Q1 262 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 BPIFB2Q8N4F0 458 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 VOPP1Q96AW1 172 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 FAM3DQ96BQ1 224 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF764Q96H86 408 aaPredicted RBP14.74□□□□□ -0.05
PCDH1-203ENST00000394536 KCNK15Q9H427 330 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 ZMIZ1Q9ULJ6 1067 aa14.74□□□□□ -0.05
PCDH1-203ENST00000394536 hCG_1807616A0A1W2PRN6 198 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 RLN2P04090 185 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 GALP22466 123 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 LSSP48449 732 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms