RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HLA-HP01893 362 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 HLA-DOBP13765 273 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 IL2RGP31785 369 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 MAGOHP61326 146 aaKnown RBP15.06■□□□□ 0
SNRPA1-202ENST00000394082 RPS23P62266 143 aaKnown RBP15.06■□□□□ 0
SNRPA1-202ENST00000394082 IL1RL1Q01638 556 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 OR1Q1Q15612 314 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 FXNQ16595 210 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 TRMT5Q32P41 509 aaKnown RBP15.06■□□□□ 0
SNRPA1-202ENST00000394082 ZNF813Q6ZN06 617 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 DEF8Q6ZN54 512 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 PIWIL3Q7Z3Z3 882 aaKnown RBP15.06■□□□□ 0
SNRPA1-202ENST00000394082 FUNDC1Q8IVP5 155 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 TLCD1Q96CP7 247 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 SPDL1Q96EA4 605 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 C7orf26Q96N11 449 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 SNX18Q96RF0 628 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 FOXB1Q99853 325 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 MRPL37Q9BZE1 423 aaKnown RBP15.06■□□□□ 0
SNRPA1-202ENST00000394082 SLC52A3Q9NQ40 469 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 TCF7L2Q9NQB0 619 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 ZNF224Q9NZL3 707 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 REV1Q9UBZ9 1251 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 POFUT2Q9Y2G5 429 aa15.06■□□□□ 0
SNRPA1-202ENST00000394082 A0A0A6YYJ9 748 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 ZNF726A6NNF4 738 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 PLPP3O14495 311 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 UBL3O95164 117 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 CD79AP11912 226 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 SLC6A2P23975 617 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 RGS8P57771 180 aaPredicted RBP15.05■□□□□ -0
SNRPA1-202ENST00000394082 PMS2P3Q13401 168 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 GLIPR1L2Q4G1C9 344 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 ELFN2Q5R3F8 820 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 ZNF613Q6PF04 617 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 LINC00114Q6XXX2 140 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 RANBP3LQ86VV4 465 aaPredicted RBP15.05■□□□□ -0
SNRPA1-202ENST00000394082 C10orf111Q8N326 155 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 EMC6Q9BV81 110 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 ULBP2Q9BZM5 246 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 RACGAP1Q9H0H5 632 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 MED29Q9NX70 200 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 VAPAQ9P0L0 249 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 SLAMF8Q9P0V8 285 aa15.05■□□□□ -0
SNRPA1-202ENST00000394082 POLR3GO15318 223 aaPredicted RBP15.04■□□□□ -0
SNRPA1-202ENST00000394082 TPST2O60704 377 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 SEC14L2O76054 403 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 MFN2O95140 757 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 ACHEP22303 614 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 SRP14P37108 136 aaKnown RBP15.04■□□□□ -0
SNRPA1-202ENST00000394082 TMEM33P57088 247 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 RAB1AP62820 205 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 SCARB2Q14108 478 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 TRIP10Q15642 601 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 MSMPQ1L6U9 139 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 CARD17Q5XLA6 110 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 HIPK4Q8NE63 616 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 OR6N1Q8NGY5 312 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 ZFAND2BQ8WV99 257 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 RDH5Q92781 318 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 TXNDC15Q96J42 360 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 MOGAT1Q96PD6 335 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 CCDC28BQ9BUN5 200 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 ZNF385DQ9H6B1 395 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 SLC7A8Q9UHI5 535 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 SLC13A4Q9UKG4 626 aa15.04■□□□□ -0
SNRPA1-202ENST00000394082 EVPLLA8MZ36 301 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 HAX1O00165 279 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 RAB36O95755 333 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 TFP02787 698 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 SERPINA5P05154 406 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 CBLP22681 906 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 CDH12P55289 794 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 GALK2Q01415 458 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 PIGFQ07326 219 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 ZP4Q12836 540 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 MMEL1Q495T6 779 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 PAGE3Q5JUK9 113 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 DPPA2Q7Z7J5 298 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 MEX3DQ86XN8 651 aaKnown RBP15.03■□□□□ -0
SNRPA1-202ENST00000394082 ARMC8Q8IUR7 673 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 OR5J2Q8NH18 312 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 OR6X1Q8NH79 312 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 TPK1Q9H3S4 243 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 TMBIM4Q9HC24 238 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 CCDC167Q9P0B6 97 aa15.03■□□□□ -0
SNRPA1-202ENST00000394082 ZNF346Q9UL40 294 aaKnown RBP15.03■□□□□ -0
SNRPA1-202ENST00000394082 SLC22A23A1A5C7 686 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 CHP2O43745 196 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 ERLIN1O75477 346 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 B4GALT1P15291 398 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 LSP1P33241 339 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 GPR6P46095 362 aaPredicted RBP15.02■□□□□ -0
SNRPA1-202ENST00000394082 GIPRP48546 466 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 PTDSS1P48651 473 aaKnown RBP15.02■□□□□ -0
SNRPA1-202ENST00000394082 CSNK1A1P48729 337 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 IDH3AP50213 366 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 ATP4BP51164 291 aa15.02■□□□□ -0
SNRPA1-202ENST00000394082 PCBP3P57721 371 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms