RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 RELL2Q8NC24 303 aaPredicted RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 NOXO1Q8NFA2 376 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 OR2T33Q8NG76 320 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 NRG4Q8WWG1 115 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 SEMA6AQ9H2E6 1030 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 KRT84Q9NSB2 600 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ERRFI1Q9UJM3 462 aaPredicted RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 HSPE1-MOB4S4R3N1 261 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 IGHV3-15A0A0B4J1V0 119 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 TRGV8A0A0C4DH27 118 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 RNF13O43567 381 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 SLC43A1O75387 559 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 OR6A2O95222 327 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 GOSR1O95249 250 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 GIPRP48546 466 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ASCL1P50553 236 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 FOXF2Q12947 444 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 NPRL3Q12980 569 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 TMED1Q13445 227 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 PGGHGQ32M88 737 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 THEM4Q5T1C6 240 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 SLC25A47Q6Q0C1 308 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 C17orf78Q8N4C9 275 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 CBR4Q8N4T8 237 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 FAM169BQ8N8A8 192 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 OR4Q3Q8NH05 313 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 TRUB1Q8WWH5 349 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 ZNF385AQ96PM9 386 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 SLC29A1Q99808 456 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 MARCH7Q9H992 704 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 NOSIPQ9Y314 301 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ARPC4-TTLL3A0A0A6YYG9 625 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 A8MXE2 369 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 LRRTM2O43300 516 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 HMGN1P05114 100 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 PRKACGP22612 351 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 PTDSS1P48651 473 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 RAD23AP54725 363 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 ADARB1P78563 741 aaKnown RBP11.73□□□□□ -0.53
USP44-202ENST00000393091 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
USP44-202ENST00000393091 MESTQ5EB52 335 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 FBXW9Q5XUX1 488 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 BTLAQ7Z6A9 289 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 OR52L1Q8NGH7 329 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 CIB1Q99828 191 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 PRRG4Q9BZD6 226 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 VCX3BQ9H321 246 aa11.73□□□□□ -0.53
USP44-202ENST00000393091 J3QKU1 62 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 EI24O14681 340 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 SURF4O15260 269 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 ZNHIT1O43257 154 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 TRMUO75648 421 aaKnown RBP11.72□□□□□ -0.53
USP44-202ENST00000393091 IFNGR1P15260 489 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 IGFBP2P18065 325 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 SLC27A4Q6P1M0 643 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 USP51Q70EK9 711 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 MCEMP1Q8IX19 187 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 C10orf53Q8N6V4 93 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 RNF217Q8TC41 542 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 SAMD8Q96LT4 415 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 EGLN3Q9H6Z9 239 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 IGHG1P01857 330 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 CTXN1P60606 82 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 NPEPL1Q8NDH3 523 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 TEX47Q8TBZ9 253 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 HDAC2Q92769 488 aaKnown RBP11.72□□□□□ -0.53
USP44-202ENST00000393091 KATNB1Q9BVA0 655 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 POLDIP3Q9BY77 421 aaKnown RBP11.72□□□□□ -0.53
USP44-202ENST00000393091 RACGAP1Q9H0H5 632 aa11.72□□□□□ -0.53
USP44-202ENST00000393091 MOV10Q9HCE1 1003 aaKnown RBP11.72□□□□□ -0.53
USP44-202ENST00000393091 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 DVL2O14641 736 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 POU3F1Q03052 451 aaPredicted RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 PTGES3Q15185 160 aaKnown RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 AAED1Q7RTV5 226 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 LIX1LQ8IVB5 337 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 CCDC36Q8IYA8 594 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 SMPD3Q9NY59 655 aaPredicted RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 KIF17Q9P2E2 1029 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PROCRQ9UNN8 238 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PRSS37A4D1T9 235 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 BCL10O95999 233 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PPP3CBP16298 524 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms