RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RPS27P42677 84 aaKnown RBP23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 MAGEB1P43366 347 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 ZNF57Q68EA5 555 aaPredicted RBP23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 ZNF519Q8TB69 540 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 STK35Q8TDR2 534 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 MAP6Q96JE9 813 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 KLHL15Q96M94 604 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 POU2F3Q9UKI9 436 aa23.13■■□□□ 1.29
SMARCD3-203ENST00000392811 TMEM200CA6NKL6 621 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 LANCL1O43813 399 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 KRT8P05787 483 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 TFPIP10646 304 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 PSKH1P11801 424 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 TDGF1P13385 188 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 SRMP19623 302 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 RPL27P61353 136 aaKnown RBP23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 LCN10Q6JVE6 187 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 PLET1Q6UQ28 207 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 DPY19L4Q7Z388 723 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 HGDQ93099 445 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 ABHD1Q96SE0 405 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 INTS14Q96SY0 518 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 BRD7Q9NPI1 651 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 CLEC4AQ9UMR7 237 aa23.12■■□□□ 1.29
SMARCD3-203ENST00000392811 AHSA1O95433 338 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 CFIP05156 583 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ALOX5APP20292 161 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 NKX2-5P52952 324 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 DUSP18Q8NEJ0 188 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 OR2I1PQ8NGU4 316 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 TMEM234Q8WY98 164 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 EDAQ92838 391 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 NAT6Q93015 286 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 MNTQ99583 582 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 NPAS1Q99742 590 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 THAP7Q9BT49 309 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 TSPAN10Q9H1Z9 355 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 GALNT9Q9HCQ5 603 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ZNF221Q9UK13 617 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 IKZF2Q9UKS7 526 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ANKUB1A6NFN9 424 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 PLPP3O14495 311 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ONECUT2O95948 504 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 C17orf67Q0P5P2 114 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ALKBH1Q13686 389 aaKnown RBP23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 PPP1R3BQ86XI6 285 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ZNF417Q8TAU3 575 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 TRIM63Q969Q1 353 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 RFT1Q96AA3 541 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 DERL3Q96Q80 235 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 ZNF587Q96SQ5 575 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 SPSB2Q99619 263 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 SLC25A18Q9H1K4 315 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 TXNIPQ9H3M7 391 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 FRRS1LQ9P0K9 344 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 TEKT2Q9UIF3 430 aa23.11■■□□□ 1.29
SMARCD3-203ENST00000392811 FAM240BA0A1B0GVZ2 78 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 PRSS37A4D1T9 235 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 HMX3A6NHT5 357 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 OR6A2O95222 327 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 ATAD3CQ5T2N8 411 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 PYHIN1Q6K0P9 492 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 CPEB2Q7Z5Q1 589 aaKnown RBP23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 EGFL6Q8IUX8 553 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 GFI1Q99684 422 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 OCIAD1Q9NX40 245 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 NLKQ9UBE8 527 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 B9D1Q9UPM9 204 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 ADAMTS9Q9P2N4 1935 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 CPAMD8Q8IZJ3 1885 aa23.1■■□□□ 1.29
SMARCD3-203ENST00000392811 TRIM3O75382 744 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 PHF19Q5T6S3 580 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 OR5AK2Q8NH90 309 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 THEM6Q8WUY1 208 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 PMEPA1Q969W9 287 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 C8orf44Q96CB5 159 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 CRB3Q9BUF7 120 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 ING1Q9UK53 422 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 FKBP7Q9Y680 259 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 NR4A2P43354 598 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 EGR3Q06889 387 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 MRPL28Q13084 256 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 C5orf46Q6UWT4 87 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 IFI44Q8TCB0 444 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 ST8SIA1Q92185 356 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 ST6GAL2Q96JF0 529 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 PRMT8Q9NR22 394 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 MED11Q9P086 117 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 TMEM14AQ9Y6G1 99 aa23.09■■□□□ 1.29
SMARCD3-203ENST00000392811 A0A1B0GTH9 108 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 FTCDNL1E5RQL4 147 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 EEF1E1O43324 174 aaKnown RBP23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 OR2T1O43869 369 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 ATP6V1G1O75348 118 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 TRAPPC2P0DI81 140 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 TRAPPC2BP0DI82 140 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 IL11P20809 199 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 INSM1Q01101 510 aaPredicted RBP23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 OTPQ5XKR4 325 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 ASB18Q6ZVZ8 466 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms