RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GP2P55259 537 aaKnown RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 GALEQ14376 348 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 GLB1L2Q8IW92 636 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 KCTD12Q96CX2 325 aaKnown RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 ARL6Q9H0F7 186 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 I3L521 148 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 AIMP2Q13155 320 aaKnown RBP15.19■□□□□ 0.02
SCN3B-202ENST00000392770 MSRB3Q8IXL7 192 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 TMEM106AQ96A25 262 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 PAPOLGQ9BWT3 736 aaKnown RBP15.19■□□□□ 0.02
SCN3B-202ENST00000392770 SPEF1Q9Y4P9 236 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 FCGR2AP12318 317 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 RAC2P15153 192 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 BDKRB2P30411 391 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 BPHLQ86WA6 291 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-202ENST00000392770 STEAP2Q8NFT2 490 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 MRPS2Q9Y399 296 aaKnown RBP15.19■□□□□ 0.02
SCN3B-202ENST00000392770 BORCS7-ASMTA0A0B4J1R7 106 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 HLA-DMAP28067 261 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 TMEM178AQ8NBL3 297 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 SNAPC3Q92966 411 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 CHST11Q9NPF2 352 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF175Q9Y473 711 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 TMEM184BQ9Y519 407 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-202ENST00000392770 ATP1B1P05026 303 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 AGERQ15109 404 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 WWTR1Q9GZV5 400 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 NTN4Q9HB63 628 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 CMC2Q9NRP2 79 aa15.19■□□□□ 0.02
SCN3B-202ENST00000392770 SC5DO75845 299 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 HTR2CP28335 458 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 AGTR1P30556 359 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 MEF2DQ14814 521 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 HYLS1Q96M11 299 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SYT3Q9BQG1 590 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SLC25A19Q9HC21 320 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 HINT3Q9NQE9 182 aaKnown RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 MBD1Q9UIS9 605 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 F5H5P2 479 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 TFP02787 698 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 IL9P15248 144 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 FAM76BQ5HYJ3 339 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 CPT1CQ8TCG5 803 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SLC38A1Q9H2H9 487 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 TSPAN4O14817 238 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 OR2J2O76002 312 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 S100A6P06703 90 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SNRPD2P62316 118 aaKnown RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 CCDC71LQ8N9Z2 235 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 OR13C9Q8NGT0 318 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 STOML3Q8TAV4 291 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SLC25A43Q8WUT9 341 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 NRTNQ99748 197 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 PPIL3Q9H2H8 161 aaKnown RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 ACOXLQ9NUZ1 547 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF346Q9UL40 294 aaKnown RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 ADAM18Q9Y3Q7 739 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SURF4O15260 269 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 ZNF806P0C7X5 589 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 TAS2R31P59538 309 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 HSF1Q00613 529 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 PRTGQ2VWP7 1150 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 CD163Q86VB7 1156 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 BBS1Q8NFJ9 593 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 HMGCLL1Q8TB92 370 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 NOX3Q9HBY0 568 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 TMEM129A0AVI4 362 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SDHAP31040 664 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 TEKQ02763 1124 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SLC36A2Q495M3 483 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 PAQR6Q6TCH4 344 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 METAP1DQ6UB28 335 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-202ENST00000392770 LYPD4Q6UWN0 246 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 ARSKQ6UWY0 536 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 SUN5Q8TC36 379 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 LRRC3BQ96PB8 259 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 OR51J1Q9H342 316 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 RCE1Q9Y256 329 aa15.18■□□□□ 0.02
SCN3B-202ENST00000392770 FAM166BA8MTA8 275 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 PRAF2O60831 178 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 SLC22A5O76082 557 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 KIAA0907Q7Z7F0 614 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 YRDCQ86U90 279 aaKnown RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OR4N2Q8NGD1 307 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 PRRT1Q99946 306 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 METTL9Q9H1A3 318 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 MEIOCA2RUB1 952 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 UBCP0CG48 685 aaKnown RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 PCBP4P57723 403 aaKnown RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 NPSR1Q6W5P4 371 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 CHPT1Q8WUD6 406 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-202ENST00000392770 ARHGDIGQ99819 225 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OR11A1Q9GZK7 315 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OR2S2Q9NQN1 319 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 PLCXD1Q9NUJ7 323 aa15.17■□□□□ 0.02
SCN3B-202ENST00000392770 OR52A1Q9UKL2 312 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms