RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CNEP1R1Q8N9A8 125 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM19Q96HH6 336 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 UBQLN4Q9NRR5 601 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM269A0A1B0GVZ9 245 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TPOP07202 933 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 FGF3P11487 239 aaPredicted RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 SRMP19623 302 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CYS1Q717R9 158 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 SLC15A4Q8N697 577 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR14A16Q8NHC5 309 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 DPH2Q9BQC3 489 aaPredicted RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 DPH1Q9BZG8 443 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 MTCH1Q9NZJ7 389 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 NSG1A0A0A6YYJ2 146 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 LMNTD1Q8N9Z9 388 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 HTR5AP47898 357 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR51A4Q8NGJ6 313 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 PIGCQ92535 297 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 BADQ92934 168 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 ERVMER34-1Q9H9K5 563 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CSF2RAP15509 400 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 HHEXQ03014 270 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CEBPEQ15744 281 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 DUSP6Q16828 381 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TBC1D28Q2M2D7 210 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 ARHGAP11BQ3KRB8 267 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 NIT2Q9NQR4 276 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 KIR2DS5A0A0G2JLQ3 304 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 A0A0G2JNG1 304 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 KIR2DS3K7RE56 304 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 NXPH2O95156 264 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TXNDC12O95881 172 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF90Q03938 601 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 KIR2DS5Q14953 304 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TIGD3Q6B0B8 471 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR2AE1Q8NHA4 323 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 RAB6CQ9H0N0 254 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 AAMDCQ9H7C9 122 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 BET1O15155 118 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SLC16A7O60669 478 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 OPRD1P41143 372 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 WDR5P61964 334 aaKnown RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 OVCH1Q7RTY7 1134 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 FRMD1Q8N878 549 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ACVR1CQ8NER5 493 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ULBP2Q9BZM5 246 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 DOCK10Q96BY6 2186 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 FUT1P19526 365 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 MAP2K6P52564 334 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 HERVK_113P61574 105 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 CPOQ8IVL8 374 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 CLDN22Q8N7P3 220 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NPRL2Q8WTW4 380 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SFT2D1Q8WV19 159 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SECTM1Q8WVN6 248 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SLC2A9Q9NRM0 540 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 RBFOX1Q9NWB1 397 aaKnown RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 YKT6O15498 198 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 MOB3CQ70IA8 216 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 FA2HQ7L5A8 372 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SLC16A14Q7RTX9 510 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF485Q8NCK3 441 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 TMEM163Q8TC26 289 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 CLDN24A6NM45 220 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 CST6Q15828 149 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SCARB1Q8WTV0 552 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NXT1Q9UKK6 140 aaKnown RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 GPR171O14626 319 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 HLA-FP30511 346 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 HES1Q14469 280 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ZFYVE21Q9BQ24 234 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NKX6-2Q9C056 277 aaPredicted RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SLC25A32Q9H2D1 315 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 SERTM2A0A1B0GWG4 89 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 ADRB1P08588 477 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 DCTP40126 519 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 PM20D1Q6GTS8 502 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
CCDC50-201ENST00000392455 CHRM2P08172 466 aa13.69□□□□□ -0.22
CCDC50-201ENST00000392455 HTR2CP28335 458 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms