RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MRPL48Q96GC5 212 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 PLGRKTQ9HBL7 147 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 IL17BQ9UHF5 180 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 HDGFL3Q9Y3E1 203 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 FKBP7Q9Y680 259 aa10.29□□□□□ -0.76
SMARCAL1-203ENST00000392128 HLA-DPB1P04440 258 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 GAAP10253 952 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF17P17021 662 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 CSRP1P21291 193 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 OPRL1P41146 370 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 CYB561P49447 251 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 HCCSP53701 268 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR12D2P58182 307 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 FOXK1P85037 733 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 FABP5Q01469 135 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 CRTC2Q53ET0 693 aaPredicted RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 DCAF10Q5QP82 559 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 PXKQ7Z7A4 578 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 TIGD4Q8IY51 512 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 PM20D2Q8IYS1 436 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 RFLNBQ8N5W9 214 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 IL22RA1Q8N6P7 574 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR5M1Q8NGP8 315 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 THAP4Q8WY91 577 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 RELTQ969Z4 430 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 GNRHR2Q96P88 292 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 TM9SF2Q99805 663 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 CDADC1Q9BWV3 514 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 MARCH7Q9H992 704 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 SRA1Q9HD15 236 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 PTPRBP23467 1997 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 A6NIZ1 184 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 FAM171A2A8MVW0 826 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 G3V3Y1 287 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 J3QLW9 94 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 LRRTM2O43300 516 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 PLPP2O43688 288 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 HLA-DOBP13765 273 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF19P17023 458 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 TCEA1P23193 301 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 RBMS1P29558 406 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 SOX6P35712 828 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 CENPAP49450 140 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 RAP1BP61224 184 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 RAP1AP62834 184 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF239Q16600 458 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 FAM205BPQ63HN1 556 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 LYPD4Q6UWN0 246 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF227Q86WZ6 799 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 S100ZQ8WXG8 99 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ASB10Q8WXI3 467 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 C5orf34Q96MH7 638 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 KCTD7Q96MP8 289 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 MNTQ99583 582 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 NUAK2Q9H093 628 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 ANKRD10Q9NXR5 420 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 TEKT2Q9UIF3 430 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 DKKL1Q9UK85 242 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 COPS3Q9UNS2 423 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 TRAPPC4Q9Y296 219 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 GSTK1Q9Y2Q3 226 aa10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 EP300Q09472 2414 aaPredicted RBP10.28□□□□□ -0.76
SMARCAL1-203ENST00000392128 SLC22A23A1A5C7 686 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 ZIC3O60481 467 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 TPPPO94811 219 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 AKR7A3O95154 331 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 IL1AP01583 271 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 BLVRAP53004 296 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 HSF1Q00613 529 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 C19orf57Q0VDD7 668 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 AIMP2Q13155 320 aaKnown RBP10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 C22orf42Q6IC83 251 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 JSRP1Q96MG2 331 aaPredicted RBP10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 OR5B2Q96R09 309 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 MED18Q9BUE0 208 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 TMED9Q9BVK6 235 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 TMEM185BQ9H7F4 350 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 AKIP1Q9NQ31 210 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 STMN3Q9NZ72 180 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 B9D1Q9UPM9 204 aa10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 RPH3AQ9Y2J0 694 aaPredicted RBP10.27□□□□□ -0.76
SMARCAL1-203ENST00000392128 E9PI62 339 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 NPIPA5E9PKD4 350 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 IFNGR1P15260 489 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 SHC1P29353 583 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 SRD5A2P31213 254 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 DNASE1L1P49184 302 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 P2RY4P51582 365 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 MELKQ14680 651 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 TRAM1Q15629 374 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 IGF2-ASQ6U949 168 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 CDC20BQ86Y33 519 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 MARCH9Q86YJ5 346 aa10.27□□□□□ -0.77
SMARCAL1-203ENST00000392128 KDM8Q8N371 416 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms