RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 ECSITQ9BQ95 431 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 NPHS2Q9NP85 383 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF229Q9UJW7 825 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 ADAM21Q9UKJ8 722 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 BAG5Q9UL15 447 aa11.8□□□□□ -0.52
TRBV4-1-201ENST00000390357 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 BBIP1A8MTZ0 92 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 KIAA1324LA8MWY0 1029 aaPredicted RBP11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 VWC2LB2RUY7 222 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 GPRIN2O60269 458 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 UBL3O95164 117 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 HPRP00739 348 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 TROVE2P10155 538 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 HLA-DOBP13765 273 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 CALCRP30988 508 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 THBS2P35442 1172 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 CAPZA2P47755 286 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 MTPNP58546 118 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF74Q16587 644 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 TRMT5Q32P41 509 aaKnown RBP11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 MMEL1Q495T6 779 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 NANOGP8Q6NSW7 305 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 ERICH5Q6P6B1 374 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF813Q6ZN06 617 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 TXNDC15Q96J42 360 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 DOK1Q99704 481 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 FOXB1Q99853 325 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 EMC6Q9BV81 110 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 ULBP2Q9BZM5 246 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 MS4A5Q9H3V2 200 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 NANOGQ9H9S0 305 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 AP3M1Q9Y2T2 418 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 CMAHPQ9Y471 501 aa11.79□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 IGHV2OR16-5A0A0B4J2B6 119 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 SLC22A23A1A5C7 686 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 CPSF4LA6NMK7 179 aaKnown RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 M0R3H8 397 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 NR4A1P22736 598 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 THBS4P35443 961 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 GLRXP35754 106 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 RBM34P42696 430 aaKnown RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 NR4A2P43354 598 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 CSNK1A1P48729 337 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 RAB1AP62820 205 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 TUBA1BP68363 451 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 TUBA4AP68366 448 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 HGFACQ04756 655 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 CAMK2DQ13557 499 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 DAG1Q14118 895 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 PHYHD1Q5SRE7 291 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 VHLLQ6RSH7 139 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 TUBA1AQ71U36 451 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 SLC35D2Q76EJ3 337 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 HDDC2Q7Z4H3 204 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 MDP1Q86V88 176 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 PCYOX1LQ8NBM8 494 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 GPR32P1Q8NGA4 272 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF566Q969W8 418 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 LRRC58Q96CX6 371 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 THOC1Q96FV9 657 aaKnown RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 SORCS2Q96PQ0 1159 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 WFDC6Q9BQY6 131 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 ZNF426Q9BUY5 554 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 GID8Q9NWU2 228 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 MED29Q9NX70 200 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 TAS2R5Q9NYW4 299 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 GLTPQ9NZD2 209 aa11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
TRBV4-1-201ENST00000390357 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 RNF13O43567 381 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 FARS2O95363 451 aaKnown RBP11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 RAB36O95755 333 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 CH25HO95992 272 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 PTHP01270 115 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 ASAH2BP0C7U1 165 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 FAM157CP0CG43 387 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 THRBP10828 461 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 CD79AP11912 226 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 ZNF35P13682 527 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 IFNGR1P15260 489 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 ZNF14P17017 642 aaPredicted RBP11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 IFNA8P32881 189 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 LSP1P33241 339 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 GZMMP51124 257 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 ARFIP2P53365 341 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 BIDP55957 195 aa11.77□□□□□ -0.53
TRBV4-1-201ENST00000390357 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms