RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 Q96M85 177 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 OR2M2Q96R28 347 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 IFT27Q9BW83 186 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 TSSK6Q9BXA6 273 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 NDEL1Q9GZM8 345 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 PLSCR4Q9NRQ2 329 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 IER3IP1Q9Y5U9 82 aa16.64■□□□□ 0.26
SMN2-202ENST00000380742 BHLHE40O14503 412 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 ZG16O60844 167 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 POU1F1P28069 291 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 OR3A2P47893 321 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 DAP3P51398 398 aaKnown RBP16.64■□□□□ 0.25
SMN2-202ENST00000380742 CRISP1P54107 249 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 RUNX1T1Q06455 604 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 SRSF1Q07955 248 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMN2-202ENST00000380742 CAMK2DQ13557 499 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 TMEM123Q8N131 208 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 RELL2Q8NC24 303 aaPredicted RBP16.64■□□□□ 0.25
SMN2-202ENST00000380742 OR52L1Q8NGH7 329 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 OR4Q3Q8NH05 313 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 OR6X1Q8NH79 312 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 ZNF519Q8TB69 540 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 TEX47Q8TBZ9 253 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 ERMAPQ96PL5 475 aaPredicted RBP16.64■□□□□ 0.25
SMN2-202ENST00000380742 PARPBPQ9NWS1 579 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 COQ3Q9NZJ6 369 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 PRSS50Q9UI38 385 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 RCE1Q9Y256 329 aa16.64■□□□□ 0.25
SMN2-202ENST00000380742 ZNF726A6NNF4 738 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 DVL2O14641 736 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 CD8BP10966 210 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 EPHA2P29317 976 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 CHRNB4P30926 498 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 ACVR1BP36896 505 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 POLR2IP36954 125 aaKnown RBP16.63■□□□□ 0.25
SMN2-202ENST00000380742 RPS6KA3P51812 740 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 SMSP52788 366 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 LGALS3BPQ08380 585 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 CDSNQ15517 529 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 CARD17Q5XLA6 110 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 TFAP2EQ6VUC0 442 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 ZNF100Q8IYN0 542 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 GALNT4Q8N4A0 578 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 IQCF1Q8N6M8 205 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 ZNF610Q8N9Z0 462 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 APH1AQ96BI3 265 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 RASD2Q96D21 266 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 ADAD1Q96M93 576 aaKnown RBP16.63■□□□□ 0.25
SMN2-202ENST00000380742 OPN3Q9H1Y3 402 aaPredicted RBP16.63■□□□□ 0.25
SMN2-202ENST00000380742 GRHPRQ9UBQ7 328 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 PROCRQ9UNN8 238 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 FLNCQ14315 2725 aa16.63■□□□□ 0.25
SMN2-202ENST00000380742 TEX13CA0A0J9YWL9 993 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 ARPC3O15145 178 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 TRMUO75648 421 aaKnown RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 SMNDC1O75940 238 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMN2-202ENST00000380742 TXNDC12O95881 172 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 IGHV3-9P01782 118 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 APEHP13798 732 aaKnown RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 ACADSP16219 412 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 SDHAP31040 664 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 GIPRP48546 466 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 ESRRGP62508 458 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 CDK5Q00535 292 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 GINS1Q14691 196 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 MESTQ5EB52 335 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 TSPO2Q5TGU0 170 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 TMEM236Q5W0B7 351 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 ACSM5Q6NUN0 579 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 MRGPRGQ86SM5 289 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 LNX2Q8N448 690 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 ARIH2OSQ8N7S6 290 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 OR2T33Q8NG76 320 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 ITLN2Q8WWU7 325 aaPredicted RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 ASB5Q8WWX0 329 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 HDAC2Q92769 488 aaKnown RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 SLC25A44Q96H78 314 aaPredicted RBP16.62■□□□□ 0.25
SMN2-202ENST00000380742 ZNF570Q96NI8 536 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 GABARAPL3Q9BY60 117 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 PIGMQ9H3S5 423 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 JKAMPQ9P055 326 aa16.62■□□□□ 0.25
SMN2-202ENST00000380742 HCFC1P51610 2035 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 IMPA2O14732 288 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 SLC43A1O75387 559 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 UPK3AO75631 287 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 PGA4P0DJD7 388 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 PGA3P0DJD8 388 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 NPRL3Q12980 569 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 PTGES3Q15185 160 aaKnown RBP16.61■□□□□ 0.25
SMN2-202ENST00000380742 ZIK1Q3SY52 487 aaPredicted RBP16.61■□□□□ 0.25
SMN2-202ENST00000380742 PHYHD1Q5SRE7 291 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 SLC35F1Q5T1Q4 408 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 FBXW10Q5XX13 1052 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 GPR139Q6DWJ6 353 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 LILRB4Q8NHJ6 448 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 MRPL13Q9BYD1 178 aaKnown RBP16.61■□□□□ 0.25
SMN2-202ENST00000380742 SLCO5A1Q9H2Y9 848 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 RIBC2Q9H4K1 309 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 SLC7A10Q9NS82 523 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms