RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MFSD8Q8NHS3 518 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 INTS14Q96SY0 518 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 OCIAD1Q9NX40 245 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 GPN3Q9UHW5 284 aaPredicted RBP20.88■□□□□ 0.93
VPS16-201ENST00000380443 TEKT2Q9UIF3 430 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 LAMP5Q9UJQ1 280 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 RASD1Q9Y272 281 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 SDK1Q7Z5N4 2213 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 PRSS37A4D1T9 235 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 CENPBD1B2RD01 187 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 HSD17B12Q53GQ0 312 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 MZT2BQ6NZ67 158 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 HPS1Q92902 700 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 LOXL4Q96JB6 756 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 TSSK2Q96PF2 358 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 KCNJ15Q99712 375 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 MYOTQ9UBF9 498 aa20.88■□□□□ 0.93
VPS16-201ENST00000380443 KLK3P07288 261 aaPredicted RBP20.87■□□□□ 0.93
VPS16-201ENST00000380443 ELK1P19419 428 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 ZFP36L1Q07352 338 aaKnown RBP20.87■□□□□ 0.93
VPS16-201ENST00000380443 ACKR1Q16570 336 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 SLC25A53Q5H9E4 307 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 FAM27D1Q5T7N8 215 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 HACD4Q5VWC8 232 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 AKAP14Q86UN6 197 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 ASB17Q8WXJ9 295 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 THRSPQ92748 146 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 DDIT4LQ96D03 193 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 ZC3HAV1LQ96H79 300 aaKnown RBP20.87■□□□□ 0.93
VPS16-201ENST00000380443 POTEKPQ9BYX7 375 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 TTTY10Q9BZA0 68 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 EXTL2Q9UBQ6 330 aa20.87■□□□□ 0.93
VPS16-201ENST00000380443 DMDP11532 3685 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 LOC102723996A0A087X1L8 192 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 A6NIZ1 184 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 FTCDNL1E5RQL4 147 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 FBXO45P0C2W1 286 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 ALOX5APP20292 161 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 MAPK3P27361 379 aaPredicted RBP20.86■□□□□ 0.93
VPS16-201ENST00000380443 CCKBRP32239 447 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 RAP1BP61224 184 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 RAP1AP62834 184 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 LPAL2Q16609 132 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 AGAP6Q5VW22 663 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 FAM205BPQ63HN1 556 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 ZNF544Q6NX49 715 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 AGAP4Q96P64 663 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 MRI1Q9BV20 369 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 SYT4Q9H2B2 425 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 APMAPQ9HDC9 416 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 B9D1Q9UPM9 204 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 EXPH5Q8NEV8 1989 aa20.86■□□□□ 0.93
VPS16-201ENST00000380443 FAM171A2A8MVW0 826 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 DCTN6O00399 190 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 MAGEB4O15481 346 aaPredicted RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 PRKAR1AP10644 381 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 OR2B6P58173 313 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 MC2RQ01718 297 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 ALKBH1Q13686 389 aaKnown RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 BAIAP2L2Q6UXY1 529 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 ZNF517Q6ZMY9 492 aaPredicted RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 YIPF7Q8N8F6 280 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 C17orf51A8MQB3 221 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 C11orf98E9PRG8 122 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 ZNF354AO60765 605 aaPredicted RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 ITGA10O75578 1167 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 UPK3AO75631 287 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 ABHD16AO95870 558 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 EPXP11678 715 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 CRABP1P29762 137 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 PLA2G5P39877 138 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 PSMB10P40306 273 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 FOXL2P58012 376 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 TAB1Q15750 504 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 TRIM61Q5EBN2 209 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 LYPD8Q6UX82 237 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 PM20D2Q8IYS1 436 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 UBQLNLQ8IYU4 475 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 RDH10Q8IZV5 341 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 BMPERQ8N8U9 685 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 TRMT10AQ8TBZ6 339 aaKnown RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 MRGPRX4Q96LA9 322 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 DEFB126Q9BYW3 111 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 C11orf54Q9H0W9 315 aaPredicted RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 PPP4R1LQ9P1A2 415 aa20.85■□□□□ 0.93
VPS16-201ENST00000380443 MRM2Q9UI43 246 aaKnown RBP20.85■□□□□ 0.93
VPS16-201ENST00000380443 FZD7O75084 574 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 AHCYP23526 432 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 PITPNBP48739 271 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 EIF2B2P49770 351 aaKnown RBP20.84■□□□□ 0.93
VPS16-201ENST00000380443 OR10A3P58181 314 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 P2RY14Q15391 338 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 SF3A2Q15428 464 aaKnown RBP20.84■□□□□ 0.93
VPS16-201ENST00000380443 NTRK2Q16620 822 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 CEP78Q5JTW2 689 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 PYHIN1Q6K0P9 492 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 LYPD4Q6UWN0 246 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 C16orf47Q6ZP98 133 aaPredicted RBP20.84■□□□□ 0.93
VPS16-201ENST00000380443 CELF2-AS1Q8N7Q2 184 aa20.84■□□□□ 0.93
VPS16-201ENST00000380443 SAMD12Q8N8I0 201 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms