RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 IL10RAQ13651 578 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF57Q68EA5 555 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 OR5M10Q6IEU7 315 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 WDR74Q6RFH5 385 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 PAMR1Q6UXH9 720 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ASB18Q6ZVZ8 466 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC29A4Q7RTT9 530 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 PRSS42Q7Z5A4 293 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF441Q8N8Z8 693 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 C7orf57Q8NEG2 295 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 GFI1Q99684 422 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 NPAS1Q99742 590 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 TBL1XR1Q9BZK7 514 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 RXFP3Q9NSD7 469 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ANKRD10Q9NXR5 420 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 TAS2R5Q9NYW4 299 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 GRHPRQ9UBQ7 328 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 COPS7AQ9UBW8 275 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF221Q9UK13 617 aa7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 ING1Q9UK53 422 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 MRTO4Q9UKD2 239 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-204ENST00000380176 TRAV1-2A0A0B4J238 106 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 TO15178 435 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ZFPL1O95159 310 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 BGLAPP02818 100 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 CXCR1P25024 350 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 RCVRNP35243 200 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 DCAF7P61962 342 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 IFITM2Q01629 132 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SF3B4Q15427 424 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 GUSBP11Q6P575 273 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 TIGD4Q8IY51 512 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 CARFQ8N187 725 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 STT3BQ8TCJ2 826 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 DUSP19Q8WTR2 217 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC25A36Q96CQ1 311 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 FOXN4Q96NZ1 517 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 THAP7Q9BT49 309 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 RSRP1Q9BUV0 290 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 PTDSS2Q9BVG9 487 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 B3GNT4Q9C0J1 378 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 HDHD2Q9H0R4 259 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC25A18Q9H1K4 315 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SYT4Q9H2B2 425 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF768Q9H5H4 540 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 WDR76Q9H967 626 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 NOX4Q9NPH5 578 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 FREM3P0C091 2139 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 LOC105371267A0A1B0GV96 52 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 CPED1A4D0V7 1026 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ANKRD61A6NGH8 418 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 HMX3A6NHT5 357 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 EEF1E1O43324 174 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 FADS1O60427 444 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 CDC40O60508 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 AKR7A3O95154 331 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 TXNDC12O95881 172 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 PLGP00747 810 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SERPINA3P01011 423 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 APEHP13798 732 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 DDOSTP39656 456 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 PITPNBP48739 271 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SRP9P49458 86 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC25A1P53007 311 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 QPRTQ15274 297 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 RNASE12Q5GAN4 147 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM209AQ5JX71 171 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 WDR45BQ5MNZ6 344 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 PLET1Q6UQ28 207 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 UNQ9370/PRO34162Q6UXP9 181 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 PM20D2Q8IYS1 436 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 SCAIQ8N9R8 606 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 RPS4Y2Q8TD47 263 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 OIT3Q8WWZ8 545 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 TRIM63Q969Q1 353 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF486Q96H40 463 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ZC3HAV1LQ96H79 300 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 DERL3Q96Q80 235 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 FYTTD1Q96QD9 318 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 OR11A1Q9GZK7 315 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 ZCCHC4Q9H5U6 513 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 RANGRFQ9HD47 186 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 MRM2Q9UI43 246 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 NPFFR2Q9Y5X5 522 aa7.21□□□□□ -1.26
PDLIM5-204ENST00000380176 LY6G6EA0A0G2JKS1 128 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM240BA0A1B0GVZ2 78 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 A0A1W2PQD3 144 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 NOTOA8MTQ0 251 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 H3BSH0 61 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 FLRT2O43155 660 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 ARHGEF9O43307 516 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 UPK3AO75631 287 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 KRT8P05787 483 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 ADRB1P08588 477 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 PRKAR1AP10644 381 aa7.2□□□□□ -1.26
PDLIM5-204ENST00000380176 SRMP19623 302 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms