RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TAS2R16Q9NYV7 291 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 NDRG3Q9UGV2 375 aa16.51■□□□□ 0.23
SSU72-203ENST00000378725 DOPEY2Q9Y3R5 2298 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 CACNA1CQ13936 2221 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 SPTBN1Q01082 2364 aaKnown RBP16.5■□□□□ 0.23
SSU72-203ENST00000378725 ARRDC5A6NEK1 342 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 CENPBD1B2RD01 187 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 DEAF1O75398 565 aaPredicted RBP16.5■□□□□ 0.23
SSU72-203ENST00000378725 NDUFB2O95178 105 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 CAMK2DQ13557 499 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 TSC22D1Q15714 1073 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 PHYHD1Q5SRE7 291 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 C22orf34Q6ZV56 151 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 GIPC3Q8TF64 312 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 FAM222BQ8WU58 562 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 ASB10Q8WXI3 467 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 TMEM54Q969K7 222 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 MUS81Q96NY9 551 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 GPX7Q96SL4 187 aaPredicted RBP16.5■□□□□ 0.23
SSU72-203ENST00000378725 DGCR6LQ9BY27 220 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 MRPL13Q9BYD1 178 aaKnown RBP16.5■□□□□ 0.23
SSU72-203ENST00000378725 ACTR6Q9GZN1 396 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 CRIM1Q9NZV1 1036 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 KCNN3Q9UGI6 736 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 ZNF346Q9UL40 294 aaKnown RBP16.5■□□□□ 0.23
SSU72-203ENST00000378725 MGAT4BQ9UQ53 548 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 ICE1Q9Y2F5 2266 aa16.5■□□□□ 0.23
SSU72-203ENST00000378725 SH3D21A4FU49 640 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 MCIDASD6RGH6 385 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 LYZL6O75951 148 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 KRT33AO76009 404 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 CD14P08571 375 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 PGA4P0DJD7 388 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 PGA3P0DJD8 388 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 EPXP11678 715 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 FASP25445 335 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 RPL27P61353 136 aaKnown RBP16.49■□□□□ 0.23
SSU72-203ENST00000378725 RUNX1T1Q06455 604 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 MELKQ14680 651 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 ATP6AP1Q15904 470 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 HIST3H3Q16695 136 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 RFX4Q33E94 735 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 CARD17Q5XLA6 110 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 ANKRD34AQ69YU3 496 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 SMARCD3Q6STE5 483 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 THSD4Q6ZMP0 1018 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 BHLHA15Q7RTS1 189 aaPredicted RBP16.49■□□□□ 0.23
SSU72-203ENST00000378725 HDDC2Q7Z4H3 204 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 IGFN1Q86VF2 1251 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 C10orf67Q8IYJ2 551 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 GPR137CQ8N3F9 429 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 AQP11Q8NBQ7 271 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 OR10G2Q8NGC3 310 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 ZNF566Q969W8 418 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 NRBF2Q96F24 287 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 COL12A1Q99715 3063 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 NDEL1Q9GZM8 345 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 GPR35Q9HC97 309 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 NRIP3Q9NQ35 241 aa16.49■□□□□ 0.23
SSU72-203ENST00000378725 STX18Q9P2W9 335 aaKnown RBP16.49■□□□□ 0.23
SSU72-203ENST00000378725 ZNF587BE7ETH6 402 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 TRMUO75648 421 aaKnown RBP16.48■□□□□ 0.23
SSU72-203ENST00000378725 FCGR1AP12314 374 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 ACADSP16219 412 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 IL32P24001 234 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 ROR2Q01974 943 aaKnown RBP16.48■□□□□ 0.23
SSU72-203ENST00000378725 TGFBR3Q03167 851 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 DAZAP2Q15038 168 aaPredicted RBP16.48■□□□□ 0.23
SSU72-203ENST00000378725 GABRA6Q16445 453 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 ZFP1Q6P2D0 407 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 CD300LDQ6UXZ3 194 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 DPY19L2P2Q6ZN68 376 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 FAM122BQ7Z309 247 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 C1orf162Q8NEQ5 155 aaPredicted RBP16.48■□□□□ 0.23
SSU72-203ENST00000378725 ZNF519Q8TB69 540 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 S100PBPQ96BU1 408 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 TSPAN32Q96QS1 320 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 FEVQ99581 238 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 KATNB1Q9BVA0 655 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 GLTPQ9NZD2 209 aa16.48■□□□□ 0.23
SSU72-203ENST00000378725 PDP1Q9P0J1 537 aaPredicted RBP16.48■□□□□ 0.23
SSU72-203ENST00000378725 M0R3G1 203 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 E2F6O75461 281 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 IGHG1P01857 330 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 THBDP07204 575 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 GSTM3P21266 225 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 RPL4P36578 427 aaKnown RBP16.47■□□□□ 0.23
SSU72-203ENST00000378725 CSNK1A1P48729 337 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 ERVK-25P63136 954 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 COX10Q12887 443 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 STK11Q15831 433 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 FAM205BPQ63HN1 556 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 ZNF787Q6DD87 383 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 HMBOX1Q6NT76 420 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 SHQ1Q6PI26 577 aaKnown RBP16.47■□□□□ 0.23
SSU72-203ENST00000378725 LRFN4Q6PJG9 635 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 ZNF620Q6ZNG0 422 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 RASSF6Q6ZTQ3 369 aa16.47■□□□□ 0.23
SSU72-203ENST00000378725 P2RY8Q86VZ1 359 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms