RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NCK1P16333 377 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 FUT1P19526 365 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 TTKP33981 857 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 RBM34P42696 430 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 GSK3BP49841 420 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 IDH3GP51553 393 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 RIPPLY3P57055 190 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CLEC12BQ2HXU8 276 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CLEC9AQ6UXN8 241 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF813Q6ZN06 617 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC46A3Q7Z3Q1 461 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 MAGEE2Q8TD90 523 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 PRRC1Q96M27 445 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 FNDC11Q9BVV2 318 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CACNG6Q9BXT2 260 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 MYLK2Q9H1R3 596 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 NELFAQ9H3P2 528 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 MEPEQ9NQ76 525 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CBLN4Q9NTU7 201 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 TAS2R5Q9NYW4 299 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 RHCGQ9UBD6 479 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 EGFL7Q9UHF1 273 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 GDF2Q9UK05 429 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 MED31Q9Y3C7 131 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 CADP27708 2225 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 USF3Q68DE3 2245 aa10.09□□□□□ -0.79
SMARCE1-203ENST00000377808 A0A1W2PRG6 482 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 J3KTA2 159 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 OVOL3O00110 214 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 PIP5K1CO60331 668 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 GMNNO75496 209 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 BCL10O95999 233 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 CD8AP01732 235 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 F13BP05160 661 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 CELA3BP08861 270 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ASAH2BP0C7U1 165 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 CECR9P0C854 216 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 PAX1P15863 534 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 PRDX6P30041 224 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 CLRN1P58418 232 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 MXRA7P84157 204 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ST3GAL3Q11203 375 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 IFI44LQ53G44 452 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 C1QTNF12Q5T7M4 302 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF544Q6NX49 715 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 BIVMQ86UB2 503 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 DTX2Q86UW9 622 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 MDP1Q86V88 176 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 WDFY1Q8IWB7 410 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 CIARTQ8N365 385 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 RNF148Q8N7C7 305 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 HTRA1Q92743 480 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF566Q969W8 418 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 LRR1Q96L50 414 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ADAD1Q96M93 576 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF426Q9BUY5 554 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 SEC61A2Q9H9S3 476 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 MOV10Q9HCE1 1003 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 SPAG4Q9NPE6 437 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
SMARCE1-203ENST00000377808 SSX4O60224 188 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 NDUFS7O75251 213 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 IGHG1P01857 330 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 HLA-HP01893 362 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 THRBP10828 461 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 IFI30P13284 250 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 TCN1P20061 433 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 PAX7P23759 505 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ACVR1BP36896 505 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 AQP2P41181 271 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 NUDT6P53370 316 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 NAAAQ02083 359 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 RPL18Q07020 188 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 PIGFQ07326 219 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ZP4Q12836 540 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 TOP3AQ13472 1001 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 RAB35Q15286 201 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CBLL1Q75N03 491 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 MEX3DQ86XN8 651 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 RBM15BQ8NDT2 890 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 OR6X1Q8NH79 312 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 FBXO17Q96EF6 278 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 BOD1Q96IK1 185 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 COX4I2Q96KJ9 171 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 FOXB1Q99853 325 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 KATNB1Q9BVA0 655 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 BARX1Q9HBU1 254 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 INIPQ9NRY2 104 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 GLTPQ9NZD2 209 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 A4GNTQ9UNA3 340 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms