RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	CLPS	P04118	112 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	IFI6	P09912	130 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	SDHB	P21912	280 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	STAT5A	P42229	794 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	RPS15	P62841	145 aa	Known RBP	10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	NCF4	Q15080	339 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	TRIP6	Q15654	476 aa	Known RBP	10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	ISX	Q2M1V0	245 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	GXYLT1	Q4G148	440 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	C6orf15	Q6UXA7	325 aa	Predicted RBP	10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM131A	Q6UXB0	335 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	APOOL	Q6UXV4	268 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	WDR88	Q6ZMY6	472 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	GDPD1	Q8N9F7	314 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF251	Q9BRH9	671 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	MED18	Q9BUE0	208 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	PDCD10	Q9BUL8	212 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	ANKRD19P	Q9H560	264 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	OSGIN1	Q9UJX0	560 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	PCNX2	A6NKB5	2137 aa		10.64	□□□□□ -0.71
LMO7-204	ENST00000377499	NSG1	A0A0A6YYJ2	146 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM240B	A0A1B0GVZ2	78 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	EFCAB10	A6NFE3	127 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ARGFX	A6NJG6	315 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	MASP2	O00187	686 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	CHP2	O43745	196 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR2J2	O76002	312 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	MB	P02144	154 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC26A5	P58743	744 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	SCN1B	Q07699	218 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	MED22	Q15528	200 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	HES3	Q5TGS1	186 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	C9orf62	Q8N4C0	152 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	TMEM156	Q8N614	296 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR2T33	Q8NG76	320 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR8J1	Q8NGP2	316 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	EDARADD	Q8WWZ3	215 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ASB15	Q8WXK1	588 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC25A36	Q96CQ1	311 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	HS6ST2	Q96MM7	605 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	SHARPIN	Q9H0F6	387 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	WNT5B	Q9H1J7	359 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR51E2	Q9H255	320 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR52D1	Q9H346	318 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	NIPAL2	Q9H841	368 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499		A0A1B0GWJ7	208 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	hCG_1807616	A0A1W2PRN6	198 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR6C76	A6NM76	312 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	CDC42EP2	O14613	210 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	CLN5	O75503	358 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	DHFR	P00374	187 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	TNFSF8	P32971	234 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OMP	P47874	163 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	MASP1	P48740	699 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	INPP1	P49441	399 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	GPR143	P51810	404 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	SNRPE	P62304	92 aa	Known RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	INSM1	Q01101	510 aa	Predicted RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	TNK1	Q13470	666 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	TSC22D1	Q15714	1073 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM74A1	Q5RGS3	127 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF440	Q8IYI8	595 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	BOLL	Q8N9W6	283 aa	Known RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	JSRP1	Q96MG2	331 aa	Predicted RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	RIMS4	Q9H426	269 aa	Predicted RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF160	Q9HCG1	818 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	FER1L5	A0AVI2	2057 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM183A	A6NL82	134 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	PRKY	O43930	277 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	RCBTB2	O95199	551 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	WDPCP	O95876	746 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	RAF1	P04049	648 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	CELA2A	P08217	269 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	COX5B	P10606	129 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	GP1BB	P13224	206 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	MAK	P20794	623 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ZP3	P21754	424 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	S100P	P25815	95 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	PTBP1	P26599	531 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ACAA2	P42765	397 aa	Known RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ETFRF1	Q6IPR1	90 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	IL20RB	Q6UXL0	311 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	CMIP	Q8IY22	773 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	BMPER	Q8N8U9	685 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	OR51V1	Q9H2C8	321 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	ELF5	Q9UKW6	265 aa	Predicted RBP	10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	VDAC3	Q9Y277	283 aa		10.63	□□□□□ -0.71
LMO7-204	ENST00000377499	IGLV3-12	A0A075B6K2	115 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	CLCA1	A8K7I4	914 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499		E9PI62	339 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	PDCD5	O14737	125 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	RGS11	O94810	467 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	SOX6	P35712	828 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	MXD1	Q05195	221 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	ZSWIM7	Q19AV6	140 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	PYDC2	Q56P42	97 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	WBP2NL	Q6ICG8	309 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	LAIR2	Q6ISS4	152 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	ARHGAP11A	Q6P4F7	1023 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms