RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SIRT6Q8N6T7 355 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 PLPP5Q8NEB5 264 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF597Q96LX8 424 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ATOH8Q96SQ7 321 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 TCRBV3S1A0A5B6 114 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 RNF212BA8MTL3 300 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 AKR7A3O95154 331 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GABARAPO95166 117 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ATXN1LP0C7T5 689 aaKnown RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 DHRS4L1P0CG22 281 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GPLD1P80108 840 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CRMP1Q14194 572 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 RBMS2Q15434 407 aaKnown RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 NECAP1Q8NC96 275 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 FAM71CQ8NEG0 241 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 EMG1Q92979 244 aaKnown RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 EMC6Q9BV81 110 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 SDK1Q7Z5N4 2213 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR8U8P0C7N1 319 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 IMPA1P29218 277 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 FABP6P51161 128 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ACSM1Q08AH1 577 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF813Q6ZN06 617 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 DCXRQ7Z4W1 244 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 SLC30A7Q8NEW0 376 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 FABP7O15540 132 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 PAX6P26367 422 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 DMRTC1Q5HYR2 192 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GLYATL3Q5SZD4 288 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 SFXN4Q6P4A7 337 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR56B1Q8NGI3 324 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR4Q3Q8NH05 313 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR51H1Q8NH63 302 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 OR14A16Q8NHC5 309 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 SEC22CQ9BRL7 303 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 YOD1Q5VVQ6 348 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GHRLQ9UBU3 117 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CLEC2DQ9UHP7 191 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 GIPRP48546 466 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 TSPAN31Q12999 210 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 SIAH3Q8IW03 269 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 TVP23CQ96ET8 276 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 TSSK2Q96PF2 358 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 YIF1AO95070 293 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 APEX1P27695 318 aaKnown RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 MEP1BQ16820 701 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 FAM199XQ6PEV8 388 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 RBM12BQ8IXT5 1001 aaKnown RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 OR6T1Q8NGN1 323 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 UBE2FQ969M7 185 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 UBL7Q96S82 380 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 ARV1Q9H2C2 271 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 FN3KRPQ9HA64 309 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 SNX11Q9Y5W9 270 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 C7orf72A4D263 438 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 GCAP28676 217 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF92Q03936 586 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 OPCMLQ14982 345 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 RNF151Q2KHN1 245 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 ISG20Q96AZ6 181 aaKnown RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 GPR173Q9NS66 373 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 CNOT2Q9NZN8 540 aaKnown RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 TCN2P20062 427 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 CASP3P42574 277 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 ARRDC2Q8TBH0 407 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 CHTF18Q8WVB6 975 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 HLA-CQ95604 372 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 GPR78Q96P69 363 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 SERTM2A0A1B0GWG4 89 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 HCRTR1O43613 425 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 GLYR1Q49A26 553 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-201ENST00000375820 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 SVBPQ8N300 66 aa12.66□□□□□ -0.38
COL4A1-201ENST00000375820 WDR76Q9H967 626 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms