RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 ZPLD1Q8TCW7 415 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 RASD2Q96D21 266 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 DDOQ99489 341 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 DPYSL5Q9BPU6 564 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
MSH5-202ENST00000375740 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 M0R233 179 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 PNMTP11086 282 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 AHCYP23526 432 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 NAA10P41227 235 aaPredicted RBP12.71□□□□□ -0.37
MSH5-202ENST00000375740 GRK6P43250 576 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 PON3Q15166 354 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 CD276Q5ZPR3 534 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 MTFR2Q6P444 385 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 MZT2AQ6P582 158 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 CEACAM19Q7Z692 300 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 HGDQ93099 445 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
MSH5-202ENST00000375740 SEC16AO15027 2179 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 ARPC3O15145 178 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 GMFGO60234 142 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 ICOSLGO75144 302 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 CD3GP09693 182 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 OR2T7P0C7T2 308 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 CD53P19397 219 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 MST1P26927 711 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 AQP2P41181 271 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 CXCL12P48061 93 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 TAS2R43P59537 309 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 RPS4XP62701 263 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 SLC36A2Q495M3 483 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 OR2T27Q8NH04 317 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 MOGAT1Q96PD6 335 aa12.71□□□□□ -0.38
MSH5-202ENST00000375740 CNN2Q99439 309 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 MRTO4Q9UKD2 239 aaKnown RBP12.71□□□□□ -0.38
MSH5-202ENST00000375740 K7ESF4 209 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 DCNP07585 359 aaKnown RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 DIO1P49895 249 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 PRPS1P60891 318 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 ZNF74Q16587 644 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 NHLRC3Q5JS37 347 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 C17orf107Q6ZR85 190 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 ZNF563Q8TA94 476 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 CLDN23Q96B33 292 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 CCNL2Q96S94 520 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 METTL17Q9H7H0 456 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 BRD7Q9NPI1 651 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 SEMA5BQ9P283 1151 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 CLEC4AQ9UMR7 237 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 TNRC18O15417 2968 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 MPDZO75970 2070 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 LAMA1P25391 3075 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 MEIKINA0A087WXM9 373 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 LPLP06858 475 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 EGR4Q05215 589 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 LTBQ06643 244 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 GGTLC2Q14390 218 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 TRAM1Q15629 374 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 SFRP5Q5T4F7 317 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 C9orf40Q8IXQ3 194 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 POMGNT2Q8NAT1 580 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 GIMAP1Q8WWP7 306 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 OIT3Q8WWZ8 545 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 GHSRQ92847 366 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 Q96M85 177 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 SFXN2Q96NB2 322 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 DMRTA2Q96SC8 542 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 NUDT22Q9BRQ3 303 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 CHIAQ9BZP6 476 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
MSH5-202ENST00000375740 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 NANSQ9NR45 359 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 FGF21Q9NSA1 209 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 MKL2Q9ULH7 1088 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 SPATA2Q9UM82 520 aa12.7□□□□□ -0.38
MSH5-202ENST00000375740 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SPI1P17947 270 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 PTBP1P26599 531 aaKnown RBP eCLIP12.69□□□□□ -0.383e-8■■■□□ 16.6
MSH5-202ENST00000375740 CDKN2AP42771 156 aaKnown RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 NRG3P56975 720 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 GSG1Q2KHT4 349 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 ACSM3Q53FZ2 586 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 HLA-DQA1Q5Y7H0 255 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms