RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 EEFSECP57772 596 aaKnown RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 GPR50Q13585 617 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 EIPR1Q53HC9 387 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PTCRAQ6ISU1 281 aaPredicted RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 MON1BQ7L1V2 547 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 GPRIN1Q7Z2K8 1008 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 GDPD1Q8N9F7 314 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 C2CD4AQ8NCU7 369 aaPredicted RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 OR2AP1Q8NGE2 309 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 RHOXF1Q8NHV9 184 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 RAB2BQ8WUD1 216 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 MCHR2Q969V1 340 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 REEP6Q96HR9 211 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FTHL17Q9BXU8 183 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PITPNM3Q9BZ71 974 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ANKHQ9HCJ1 492 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 TRIM36Q9NQ86 728 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR14J1Q9UGF5 321 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 MICAL3Q7RTP6 2002 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 A0A1W2PPM1 405 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR11H12B2RN74 326 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SDHDO14521 159 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 AIREO43918 545 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FAM189A1O60320 539 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PIAS1O75925 651 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 BMP7P18075 431 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 TAC1P20366 129 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 RIPPLY1Q0D2K3 151 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ODF4Q2M2E3 257 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 TREML2Q5T2D2 321 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 NSUN5P2Q63ZY6 315 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FAAP20Q6NZ36 180 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FAM198BQ6UWH4 519 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ZDHHC24Q6UX98 284 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CENPVQ7Z7K6 275 aaPredicted RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 ADIPOR2Q86V24 386 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 LRRC52Q8N7C0 313 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ZNF614Q8N883 585 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 BVESQ8NE79 360 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR11H1Q8NG94 326 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR11H2Q8NH07 326 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 MAFAQ8NHW3 353 aaPredicted RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 ART4Q93070 314 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CTHRC1Q96CG8 243 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 TEX37Q96LM6 180 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 LMF2Q9BU23 707 aaKnown RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 DSN1Q9H410 356 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SRD5A3Q9H8P0 318 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FBXO5Q9UKT4 447 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 RNF11Q9Y3C5 154 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ARL5AQ9Y689 179 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 POLR2AP24928 1970 aaKnown RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 PHOX2AO14813 284 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PCDH7O60245 1069 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 MSCO60682 206 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CNMDO75829 334 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR2J3O76001 311 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PROSCO94903 275 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 LSM8O95777 96 aaKnown RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 IGHV2-5P01817 119 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SERPIND1P05546 499 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 BCKDHBP21953 392 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FSHRP23945 695 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 GABRR2P28476 465 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CTSCP53634 463 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CLDN12P56749 244 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 UFM1P61960 85 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 ACVR1Q04771 509 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 COL28A1Q2UY09 1125 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 PTPN20Q4JDL3 420 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OTOP2Q7RTS6 562 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SLC34A3Q8N130 599 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CSNK1A1LQ8N752 337 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 AMER3Q8N944 861 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 NECAP1Q8NC96 275 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 OR4S2Q8NH73 311 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SCMH1Q96GD3 660 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 MSLNLQ96KJ4 702 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 HYLS1Q96M11 299 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 FAAP24Q9BTP7 215 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 NECTIN3Q9NQS3 549 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.22□□□□□ -1.25
USP48-203ENST00000374732 PACSIN3Q9UKS6 424 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 USP22Q9UPT9 525 aa7.22□□□□□ -1.25
USP48-203ENST00000374732 SMCO3A2RU48 225 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 NPEPPSL1A6NEC2 478 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 AIPO00170 330 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 TIMM8AO60220 97 aaPredicted RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 JUNP05412 331 aaKnown RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 FGF2P09038 288 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 ZNF44P15621 663 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 ITPKBP27987 946 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 CHI3L1P36222 383 aaPredicted RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 RFX3P48380 749 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 MARCKSL1P49006 195 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 WNT4P56705 351 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 SYPL2Q5VXT5 272 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 ACSM6Q6P461 480 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms