RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF133P52736 654 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 Q0VFX4 171 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 DCAF12Q5T6F0 453 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 TIPARPQ7Z3E1 657 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 MARCH9Q86YJ5 346 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 FAM83FQ8NEG4 500 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 GHSRQ92847 366 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 DDIT4LQ96D03 193 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 TMEM41AQ96HV5 264 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 WDR76Q9H967 626 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 GPN3Q9UHW5 284 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 B3GALT5Q9Y2C3 310 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 LOXL2Q9Y4K0 774 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 WDR87Q6ZQQ6 2873 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ITGA10O75578 1167 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 HPP00738 406 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 SERPINA3P01011 423 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 H3F3AP84243 136 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 H1FNTQ75WM6 255 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 OTOSQ8NHW6 89 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ABCB9Q9NP78 766 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ACOXLQ9NUZ1 547 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 MED11Q9P086 117 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 SDK2Q58EX2 2172 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 C9orf172C9J069 976 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 C9J4A7 227 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SEC16AO15027 2179 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SNPHO15079 494 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 AKR7A3O95154 331 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 HRGP04196 525 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF17P17021 662 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 IL11P20809 199 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 CSRP1P21291 193 aaKnown RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 ITPKBP27987 946 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 EVX1P49640 407 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 RPS7P62081 194 aaKnown RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 RPTNQ6XPR3 784 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 ARL5BQ96KC2 179 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 TBX5Q99593 518 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 CHST11Q9NPF2 352 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 A6NIZ1 184 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 CD8B2A6NJW9 211 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 J3QLW9 94 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SLC25A12O75746 678 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 STK17BO94768 372 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 AHSA1O95433 338 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 CD8BP10966 210 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF19P17023 458 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 EIF1P41567 113 aaKnown RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 RAP1BP61224 184 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 RAP1AP62834 184 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 PUDPQ08623 228 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SUMF1Q8NBK3 374 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 SLC25A43Q8WUT9 341 aaPredicted RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 GFI1Q99684 422 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 KCNJ15Q99712 375 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
PRPF4-202ENST00000374199 MRPS18CQ9Y3D5 142 aaKnown RBP11.29□□□□□ -0.6
PRPF4-202ENST00000374199 TRBV5-7A0A0A0MS05 114 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 RENP00797 406 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 OCM2P0CE71 109 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 SSPNQ14714 243 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ZMAT1Q5H9K5 638 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 DDI2Q5TDH0 399 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 FAM69BQ5VUD6 431 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 OPN5Q6U736 354 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ADAMTS17Q8TE56 1095 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 FBXL2Q9UKC9 423 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PTRH2Q9Y3E5 179 aaKnown RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms