RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 BSGP35613 385 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GLP1RP43220 463 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 ANXA11P50995 505 aaKnown RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 NAAAQ02083 359 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GUCA2AQ02747 115 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 POU4F2Q12837 409 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 CRMP1Q14194 572 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 DRAM2Q6UX65 266 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PAQR4Q8N4S7 273 aaPredicted RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 DCAF4L2Q8NA75 395 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 OR1J2Q8NGS2 313 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 OR8S1Q8NH09 359 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 WBP2Q969T9 261 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 SSX3Q99909 188 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 MESP1Q9BRJ9 268 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 TRPV4Q9HBA0 871 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 ZDHHC4Q9NPG8 344 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 KLHL28Q9NXS3 571 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 MSRAQ9UJ68 235 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GNG8Q9UK08 70 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 FBXO4Q9UKT5 387 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 MEIS3P1A6NDR6 274 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 RIIAD1A6NNX1 92 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 NDUFS1P28331 727 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PSMB10P40306 273 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PRKXP51817 358 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 HTRA4P83105 476 aaPredicted RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 DHRS2Q13268 280 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 IRF4Q15306 451 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 MRM1Q6IN84 353 aaKnown RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 STEAP1BQ6NZ63 245 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 LCTLQ6UWM7 567 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 Q7L0L9 218 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 ARL14Q8N4G2 192 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 DEFB123Q8N688 67 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 AMDHD1Q96NU7 426 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
PRPF4-201ENST00000374198 GFOD1Q9NXC2 390 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 LPAR3Q9UBY5 353 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 CACFD1Q9UGQ2 172 aa11.8□□□□□ -0.52
PRPF4-201ENST00000374198 hCG_1809904A0A1W2PP81 198 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 A0A1W2PR64 198 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 A0A1W2PRV1 198 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 COCHO43405 550 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 KCNAB3O43448 404 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 C1orf105O95561 183 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TBX6O95947 436 aaPredicted RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 HMGN2P05204 90 aaKnown RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 PGAM2P15259 253 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 NME1P15531 152 aaKnown RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 MAKP20794 623 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 LTBQ06643 244 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 AGERQ15109 404 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 KHDRBS2Q5VWX1 349 aaKnown RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 WFDC5Q8TCV5 224 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SELENOIQ9C0D9 397 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 PRDM13Q9H4Q3 707 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 MYOZ1Q9NP98 299 aaPredicted RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TIMM10BQ9Y5J6 103 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SLC5A10A0PJK1 596 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 URADA6NGE7 173 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TMEM189-UBE2V1I3L0A0 370 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 MFNGO00587 321 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 PTGER1P34995 402 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 PBX2P40425 430 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 RBM34P42696 430 aaKnown RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 OR2B8PP59922 312 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TGM3Q08188 693 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 RAB30Q15771 203 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 PRRT3Q5FWE3 981 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TMEM173Q86WV6 379 aaPredicted RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 RASGEF1AQ8N9B8 481 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 CLEC1AQ8NC01 280 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SCAMP4Q969E2 229 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ISOC2Q96AB3 205 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 C16orf58Q96GQ5 468 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SEMA6CQ9H3T2 930 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF208O43345 1280 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 RCBTB2O95199 551 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 RPN2P04844 631 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 CD5P06127 495 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 OR2T7P0C7T2 308 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms