RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 SCAIQ8N9R8 606 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 MAL2Q969L2 176 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 YIPF5Q969M3 257 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 SLC47A1Q96FL8 570 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 MAELQ96JY0 434 aaKnown RBP11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 LRRC37BQ96QE4 947 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 EMC6Q9BV81 110 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF416Q9BWM5 594 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF385DQ9H6B1 395 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 KCNK9Q9NPC2 374 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF275Q9NSD4 429 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF224Q9NZL3 707 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 FBXL3Q9UKT7 428 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 PCDHB10Q9UN67 800 aa11.22□□□□□ -0.61
TRAPPC3-201ENST00000373159 TRAV20A0A0B4J274 112 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF726A6NNF4 738 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 CLIC1O00299 241 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 PPIHO43447 177 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 SNNO75324 88 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 RP2O75695 350 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 BGLAPP02818 100 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 ANPEPP15144 967 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 B4GALT1P15291 398 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 NQO1P15559 274 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 CBLP22681 906 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 PTDSS1P48651 473 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 ARFIP2P53365 341 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 HILS1P60008 231 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 MYBPC1Q00872 1141 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 NXNQ6DKJ4 435 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 WDR93Q6P2C0 686 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 FAHD2BQ6P2I3 314 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 SHQ1Q6PI26 577 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 DHRS4L2Q6PKH6 230 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 PXKQ7Z7A4 578 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 OR6N1Q8NGY5 312 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 GTF2H4Q92759 462 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 FAHD2AQ96GK7 314 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 EPYCQ99645 322 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 FOXB1Q99853 325 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 ASPNQ9BXN1 380 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 RAD21L1Q9H4I0 556 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 NARFLQ9H6Q4 476 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 LPAR2Q9HBW0 351 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 MED29Q9NX70 200 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 MRPL39Q9NYK5 338 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 MYEF2Q9P2K5 600 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 DUSP13Q9UII6 198 aa11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 ZNF346Q9UL40 294 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-201ENST00000373159 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 C5orf58C9J3I9 102 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 NCR1O76036 304 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 UBL3O95164 117 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 RAB36O95755 333 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PNPP00491 289 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 SERPINA5P05154 406 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 NAT2P11245 290 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 LSP1P33241 339 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 POLR2JP52435 117 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 ACTG1P63261 375 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PUDPQ08623 228 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PMS2P3Q13401 168 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 CAMK2DQ13557 499 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 RAB39AQ14964 217 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 MAD2L1BPQ15013 274 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 C1orf229Q6ZS94 237 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PIWIL3Q7Z3Z3 882 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 COMTD1Q86VU5 262 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 WDFY1Q8IWB7 410 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PAIP2Q9BPZ3 127 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 PAIP1Q9H074 479 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 G6PC2Q9NQR9 355 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 SLC7A8Q9UHI5 535 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 FZR1Q9UM11 496 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 MEGF8Q7Z7M0 2845 aa11.2□□□□□ -0.62
TRAPPC3-201ENST00000373159 A0A0B4J2E0 115 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 A0A1B0GX12 115 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 PLPP3O14495 311 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 UBDO15205 165 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 TPST1O60507 370 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 AVPP01185 164 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 KITP10721 976 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 HOXB9P17482 250 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 GLIPR1L2Q4G1C9 344 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 REEP3Q6NUK4 255 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 ACSM5Q6NUN0 579 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 ZNF584Q8IVC4 421 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
TRAPPC3-201ENST00000373159 OR9I1Q8NGQ6 314 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms