RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM225BP0DP42 221 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ARSBP15848 533 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 CAV2P51636 162 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 TAS2R19P59542 299 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 TNK1Q13470 666 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 VRK2Q86Y07 508 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SDR9C7Q8NEX9 313 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 FOXRED1Q96CU9 486 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MS4A8Q9BY19 250 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLCXD1Q9NUJ7 323 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 TBC1D29Q9UFV1 150 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 A0A0D9SG52 128 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF816-ZNF321PA0A0X1KG74 233 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 CRYABP02511 175 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SULT1A3P0DMM9 295 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SULT1A4P0DMN0 295 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 EDN3P14138 238 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF26P17031 533 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 DAPP51397 102 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF91Q05481 1191 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MISPQ8IVT2 679 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR4N2Q8NGD1 307 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SMAP2Q8WU79 429 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 POM121BA6NF01 834 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 AGPAT2O15120 278 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 JUNBP17275 347 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 BCL6P41182 706 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 P2RY14Q15391 338 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 EXT1Q16394 746 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 PHYHD1Q5SRE7 291 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SYT13Q7L8C5 426 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 CLEC14AQ86T13 490 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MMP21Q8N119 569 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 LILRA3Q8N6C8 439 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 RCBTB1Q8NDN9 531 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 IL17RDQ8NFM7 739 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 STEAP2Q8NFT2 490 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MRPS2Q9Y399 296 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 A0A0U1RQK1 487 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 FAM171A2A8MVW0 826 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SCG5P05408 212 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 IL13RA1P78552 427 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 NHSL2Q5HYW2 709 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR1M1Q8NGA1 313 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 C2CD4CQ8TF44 421 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 WDR83Q9BRX9 315 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 ALOX12BO75342 701 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 HAS2Q92819 552 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 MYEF2Q9P2K5 600 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SCN9AQ15858 1988 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CDHR4A6H8M9 788 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SNCGO76070 127 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 FBXO45P0C2W1 286 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 M6PRP20645 277 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MSX1P28360 303 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF136P52737 540 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CSNK1G2P78368 415 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 YOD1Q5VVQ6 348 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 GLB1L2Q8IW92 636 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CLDN22Q8N7P3 220 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 PDFQ9HBH1 243 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SEPSECSQ9HD40 501 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF337Q9Y3M9 751 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 V9GYS6 101 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ACOT8O14734 319 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CNOT4O95628 575 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MPIG6BO95866 241 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 FGF7P21781 194 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 TNFSF4P23510 183 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SNCAP37840 140 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 PSMB10P40306 273 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ETV6P41212 452 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 PRAMEF20Q5VT98 475 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 APOOLQ6UXV4 268 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 BPHLQ86WA6 291 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 LSMEM2Q8N112 164 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 L3MBTL4Q8NA19 623 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 RBFOX1Q9NWB1 397 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 GABARAPO95166 117 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 BMP1P13497 986 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■■■■■ 35.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms