RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PPP1R3BQ86XI6 285 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 IL17RDQ8NFM7 739 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 OR5M1Q8NGP8 315 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ZNF587Q96SQ5 575 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 PSD2Q9BQI7 771 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ZNF471Q9BX82 626 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 VSX1Q9NZR4 365 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 UBQLN2Q9UHD9 624 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ZNF346Q9UL40 294 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 OR14I1A6ND48 311 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 IDSB3KWA1 339 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 FOSL2P15408 326 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 HOXB9P17482 250 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 PPICP45877 212 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 DAP3P51398 398 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 GPR50Q13585 617 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 EFR3AQ14156 821 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TMEM176BQ3YBM2 270 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 CCDC58Q4VC31 144 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ABHD12BQ7Z5M8 362 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 COMTD1Q86VU5 262 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 OR7G1Q8NGA0 311 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 THAP6Q8TBB0 222 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 GPBAR1Q8TDU6 330 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 C8orf44Q96CB5 159 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SNX18Q96RF0 628 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ZDBF2Q9HCK1 2354 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 A0A1B0GX78 115 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 EEF1E1-BLOC1S5C9J1V9 151 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ITGA3P26006 1051 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 S100A10P60903 97 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 EEF1A1P68104 462 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 FAM53BQ14153 422 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 C1orf140Q5VVS0 124 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 FAAP20Q6NZ36 180 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TMPRSS11FQ6ZWK6 438 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TMEM17Q86X19 198 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ELMOD2Q8IZ81 293 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TDHQ8IZJ6 230 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 OR5H6Q8NGV6 325 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 DVL3Q92997 716 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 NKX3-1Q99801 234 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 PHF7Q9BWX1 381 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 CST11Q9H112 138 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 DNAJB12Q9NXW2 375 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 PLEKHB1Q9UF11 243 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 COA3Q9Y2R0 106 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 A6NIZ1 184 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 CENPBD1B2RD01 187 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SLC22A5O76082 557 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 NR2C1P13056 603 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 APEHP13798 732 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 PSMB1P20618 241 aaKnown RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 POU3F4P49335 361 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ACTBP60709 375 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 RAP1BP61224 184 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 RAP1AP62834 184 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ACTG1P63261 375 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 FAPQ12884 760 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 POU4F3Q15319 338 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ACKR1Q16570 336 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 FAM69AQ5T7M9 428 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 CBLN3Q6UW01 205 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 BEST3Q8N1M1 668 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SPERTQ8NA61 448 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 OR52I2Q8NH67 350 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 LILRB4Q8NHJ6 448 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SMIM19Q96E16 107 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ZNF764Q96H86 408 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SLC41A2Q96JW4 573 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 ENKD1Q9H0I2 346 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TAS2R8Q9NYW2 309 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 NPAP1Q9NZP6 1156 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 CAMK2AQ9UQM7 478 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 SPEF1Q9Y4P9 236 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 RNF215Q9Y6U7 377 aa7.73□□□□□ -1.17
PTPRK-206ENST00000368215 TMEM212A6NML5 194 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 RP2O75695 350 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 ZFAND5O76080 213 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 POU2F2P09086 479 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 DDOSTP39656 456 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 BIDP55957 195 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 ZNF704Q6ZNC4 412 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-206ENST00000368215 OR56B4Q8NH76 319 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 STT3BQ8TCJ2 826 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 PMM1Q92871 262 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 SEC22CQ9BRL7 303 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 MED18Q9BUE0 208 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 AUNIPQ9H7T9 357 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 FLRT3Q9NZU0 649 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 CGGBP1Q9UFW8 167 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-206ENST00000368215 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 ZSCAN5BA6NJL1 495 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 PEX14O75381 377 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 GPANK1O95872 356 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 SCGB1D2O95969 90 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 RAB40ALP0C0E4 278 aa7.72□□□□□ -1.17
PTPRK-206ENST00000368215 SLC2A1P11166 492 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms