RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 FAM3DQ96BQ1 224 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 SLC17A4Q9Y2C5 497 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 A0A0A6YYJ9 748 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 TMEM221A6NGB7 291 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 SYNGR4O95473 234 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 C1QCP02747 245 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
COPA-202ENST00000368069 KIAA1958Q8N8K9 716 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 PLPP7Q8NBV4 271 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 NRTNQ99748 197 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 SUSD2Q9UGT4 822 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 A0A087WV62 115 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 F8W036 122 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 SULT1B1O43704 296 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 IGHG1P01857 330 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 LCATP04180 440 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 P04436 131 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 JMJD7P0C870 316 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 CD53P19397 219 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 HSD17B7P56937 341 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 STEAP1BQ6NZ63 245 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 FRMD1Q8N878 549 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 BCORP1Q8N888 145 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 ARL11Q969Q4 196 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 SPTSSAQ969W0 71 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 ZG16BQ96DA0 208 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 DHRS1Q96LJ7 313 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 EIF5A2Q9GZV4 153 aaKnown RBP10.73□□□□□ -0.69
COPA-202ENST00000368069 SERGEFQ9UGK8 458 aa10.73□□□□□ -0.69
COPA-202ENST00000368069 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 GABARAPH6UMI1 98 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 ALX3O95076 343 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 GAAP10253 952 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 PPP3CBP16298 524 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 ANXA7P20073 488 aaKnown RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 EMDP50402 254 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 FXYD4P59646 89 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 HEPHL1Q6MZM0 1159 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 OR14L1PQ8NHC6 308 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 SMIM19Q96E16 107 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 DDOQ99489 341 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 LDAHQ9H6V9 325 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 PLEK2Q9NYT0 353 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 ANKRD61A6NGH8 418 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 SIX6O95475 246 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 RGS19P49795 217 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 CDK5R1Q15078 307 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 TCTN1Q2MV58 587 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 RGCCQ9H4X1 137 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 ZMAT3Q9HA38 289 aaKnown RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 SIRT3Q9NTG7 399 aaPredicted RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 MMACHCQ9Y4U1 282 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 M0QYG6 137 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 SSX4O60224 188 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 CD1CP29017 333 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 CSNK1EP49674 416 aaKnown RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 BTG2P78543 158 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 TMEM196Q5HYL7 178 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 YOD1Q5VVQ6 348 aaPredicted RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 SYS1Q8N2H4 156 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 PPA2Q9H2U2 334 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 PLEKHJ1Q9NW61 149 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 GLTPQ9NZD2 209 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 A0A1B0GV50 99 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 P2RY10O00398 339 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 DVL2O14641 736 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 DIRAS3O95661 229 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 PRKACBP22694 351 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 OTX2P32243 289 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 FXNQ16595 210 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 SLC25A35Q3KQZ1 300 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 GLYATL3Q5SZD4 288 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 RCBTB1Q8NDN9 531 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 CCDC54Q8NEL0 328 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 TSSK2Q96PF2 358 aa10.72□□□□□ -0.69
COPA-202ENST00000368069 UBE2J1Q9Y385 318 aaPredicted RBP10.72□□□□□ -0.69
COPA-202ENST00000368069 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 AKR7A2O43488 359 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 LIMS3P0CW19 117 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 LIMS4P0CW20 117 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 BDKRB2P30411 391 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 GZMKP49863 264 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 EID2Q8N6I1 236 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 SEC22AQ96IW7 307 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 LOC100289279A0A1B0GTE1 492 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 ZFAND5O76080 213 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 UBBP0CG47 229 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 UBCP0CG48 685 aaKnown RBP10.71□□□□□ -0.69
COPA-202ENST00000368069 GABRB1P18505 474 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 CDK2P24941 298 aa10.71□□□□□ -0.69
COPA-202ENST00000368069 RPS27AP62979 156 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms