RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PIGMQ9H3S5 423 aa11.12□□□□□ -0.63
CDC42BPA-203ENST00000366766 S100A11P31949 105 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SSR4P51571 173 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ARF1P84077 181 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 LANCL3Q6ZV70 420 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 LIMS2Q7Z4I7 341 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 RDH10Q8IZV5 341 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 RPL3LQ92901 407 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 RAB5CP51148 216 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 CLDN6P56747 220 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ESCO2Q56NI9 601 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 EXOSC6Q5RKV6 272 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 FCRLBQ6BAA4 426 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC7A6Q92536 515 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 J3KTA2 159 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TUBG1P23258 451 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF542PQ5EBM4 170 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SMIM19Q96E16 107 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC22A11Q9NSA0 550 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 HMGN4O00479 90 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PLATP00750 562 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PSMB10P40306 273 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TLE4Q04727 773 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ST8SIA1Q92185 356 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PSMF1Q92530 271 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ARRDC3Q96B67 414 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 MED30Q96HR3 178 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 NOX4Q9NPH5 578 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 A0A1B0GX78 115 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 GYPBP06028 91 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 LIPAP38571 399 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 CATR1Q13166 79 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 Q6ZNB5 142 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 LKAAEAR1Q8TD35 194 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 B3GALT1Q9Y5Z6 326 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TRBV11-1A0A0K0K1C0 115 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PLSCR5A0PG75 271 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SBK2P0C263 348 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 BCAT2O15382 392 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ACHEP22303 614 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 BCL6P41182 706 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 P2RY14Q15391 338 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC35B4Q969S0 331 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ARPC5LQ9BPX5 153 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 OSGIN1Q9UJX0 560 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TVP23AA6NH52 213 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 AIPO00170 330 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PTPN6P29350 595 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 PLCXD3Q63HM9 321 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 KDM8Q8N371 416 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 MS4A6EQ96DS6 147 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 RSPRY1Q96DX4 576 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 ST6GALNAC5Q9BVH7 336 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 DAPP1Q9UN19 280 aa11.11□□□□□ -0.63
CDC42BPA-203ENST00000366766 TCRBV5S2A0A599 114 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 FXYD1O00168 92 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 LIM2P55344 173 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TNK1Q13470 666 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SGK3Q96BR1 496 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 LMAN1LQ9HAT1 526 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 LSM5Q9Y4Y9 91 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SDC3O75056 442 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CD46P15529 392 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 DYRK1AQ13627 763 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 MTFR2Q6P444 385 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NKX3-1Q99801 234 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NIPSNAP1Q9BPW8 284 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 EVI2BP34910 448 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR1D4P47884 311 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SPOCK1Q08629 439 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 KCNIP4Q6PIL6 250 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SEC22CQ9BRL7 303 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TRIOBPQ9H2D6 2365 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CXCL10P02778 98 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 FGL2Q14314 439 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 KRBOX4Q5JUW0 171 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 STEAP1BQ6NZ63 245 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 PIGQQ9BRB3 760 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 C11orf54Q9H0W9 315 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TRABD2BA6NFA1 517 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TBX19O60806 448 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NSA2O95478 260 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms