RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HIST1H1CP16403 213 aaKnown RBP18.39■□□□□ 0.53
SHISA4-201ENST00000362011 GABRB1P18505 474 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 ACVR1BP36896 505 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 TDGF1P3P51864 188 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 EFNB1P98172 346 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 CDK5R2Q13319 367 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 MELKQ14680 651 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 PON3Q15166 354 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 JAZF1Q86VZ6 243 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 ARIH2OSQ8N7S6 290 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF519Q8TB69 540 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 CNIH3Q8TBE1 160 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 ASB10Q8WXI3 467 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 CLN6Q9NWW5 311 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 GPR52Q9Y2T5 361 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 PCDHGB5Q9Y5G0 923 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 TTLL8A6PVC2 850 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 CLCA1A8K7I4 914 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 TRAF3IP2O43734 574 aaPredicted RBP18.38■□□□□ 0.53
SHISA4-201ENST00000362011 AGFG2O95081 481 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 PTGS2P35354 604 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 TEKQ02763 1124 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 SLC17A1Q14916 467 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 FAM205BPQ63HN1 556 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 HDDC2Q7Z4H3 204 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 SLC37A3Q8NCC5 494 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 SDR9C7Q8NEX9 313 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 OR9K2Q8NGE7 335 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 OR4K13Q8NH42 304 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 ZPLD1Q8TCW7 415 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 SSC4DQ8WTU2 575 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 APH1BQ8WW43 257 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 AASSQ9UDR5 926 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF175Q9Y473 711 aa18.38■□□□□ 0.53
SHISA4-201ENST00000362011 A6NIZ1 184 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 PRR23D1E9PI22 279 aaPredicted RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 XKRYO14609 159 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 PRR23D2P0DMB1 279 aaPredicted RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 PAICSP22234 425 aaKnown RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 ACVR2AP27037 513 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 RAP1BP61224 184 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 RAP1AP62834 184 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 RASGEF1BQ0VAM2 473 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 CRMP1Q14194 572 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 OCLNQ16625 522 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 MESTQ5EB52 335 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 TMEM201Q5SNT2 666 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF362Q5T0B9 420 aaPredicted RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 ARMC4Q5T2S8 1044 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 EEF1A1P5Q5VTE0 462 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 LEG1Q6P5S2 330 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 NHLRC1Q6VVB1 395 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 CREB3L2Q70SY1 520 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 CXXC5Q7LFL8 322 aaKnown RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 FGD2Q7Z6J4 655 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 ADCK1Q86TW2 530 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 RNF128Q8TEB7 428 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 Q96MT0 163 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 SNX18Q96RF0 628 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 SLX1AQ9BQ83 275 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 HINT3Q9NQE9 182 aaKnown RBP18.37■□□□□ 0.53
SHISA4-201ENST00000362011 ASF1BQ9NVP2 202 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 MED29Q9NX70 200 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 SHANK1Q9Y566 2161 aa18.37■□□□□ 0.53
SHISA4-201ENST00000362011 MYO9AB2RTY4 2548 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF716A6NP11 495 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 AHRRA9YTQ3 701 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ZNHIT1O43257 154 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ARHGEF9O43307 516 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 AKAP8O43823 692 aaKnown RBP18.36■□□□□ 0.53
SHISA4-201ENST00000362011 WBP4O75554 376 aaKnown RBP18.36■□□□□ 0.53
SHISA4-201ENST00000362011 RENP00797 406 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 RNF224P0DH78 156 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 FMO3P31513 532 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 SLC16A1P53985 500 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 BIDP55957 195 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 CLDN17P56750 224 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ITGADQ13349 1161 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 PRR30Q53SZ7 412 aaPredicted RBP18.36■□□□□ 0.53
SHISA4-201ENST00000362011 C6orf141Q5SZD1 244 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 MEDAGQ5VYS4 303 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 UGT2A3Q6UWM9 527 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF786Q8N393 782 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 OR5M9Q8NGP3 310 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 FNDC9Q8TBE3 224 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 HDAC2Q92769 488 aaKnown RBP18.36■□□□□ 0.53
SHISA4-201ENST00000362011 OTULINQ96BN8 352 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 TXNDC15Q96J42 360 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 DNAJC27Q9NZQ0 273 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 KLHL9Q9P2J3 617 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 ALPK2Q86TB3 2170 aa18.36■□□□□ 0.53
SHISA4-201ENST00000362011 SLC22A20A6NK97 555 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 FAM183AA6NL82 134 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 KDM4EB2RXH2 506 aaPredicted RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 M0R3G1 203 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 FCGR2AP12318 317 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 CDKN2AP42771 156 aaKnown RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 RNPS1Q15287 305 aaKnown RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 SF3B4Q15427 424 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 RBM48Q5RL73 367 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms