RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 ZNF684Q5T5D7 378 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 VASH1Q7L8A9 365 aaPredicted RBP13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 ARFGEF1Q9Y6D6 1849 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 PRKRAO75569 313 aaKnown RBP13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 CD38P28907 300 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 TLE4Q04727 773 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 Q6ZTK2 550 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF740Q8NDX6 193 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 SEMA6CQ9H3T2 930 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 E9PI62 339 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 TXNL1O43396 289 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 ITGB2P05107 769 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 FCGR2AP12318 317 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 MANEAQ5SRI9 462 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 OVCH1Q7RTY7 1134 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 CD207Q9UJ71 328 aa13.54□□□□□ -0.24
SCUBE1-202ENST00000360835 PPT1P50897 306 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 FAM111BQ6SJ93 734 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEM43Q9BTV4 400 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 GABARAPH6UMI1 98 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ABLIM3O94929 683 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 HBE1P02100 147 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MSR1P21757 451 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MRPS21P82921 87 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 AFMIDQ63HM1 303 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 FAM122CQ6P4D5 195 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 NPSR1Q6W5P4 371 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 LCORQ96JN0 433 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 CNR1P21554 472 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TNFSF4P23510 183 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 GDF1P27539 372 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ERV3-1Q14264 604 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MOB3CQ70IA8 216 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 SLC30A7Q8NEW0 376 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 HMGN4O00479 90 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 RPS10P46783 165 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF133P52736 654 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 OPN5Q6U736 354 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 FAM26EQ8N5C1 309 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 RADILQ96JH8 1075 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 I6L893 689 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 HCRTR1O43613 425 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 KLK8O60259 260 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF44P15621 663 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TAGLNQ01995 201 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 OR2L13Q8N349 312 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 UBE2FQ969M7 185 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 SLC6A18Q96N87 628 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ICMTO60725 284 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEM176BQ3YBM2 270 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 GLYATL3Q5SZD4 288 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 NUDT22Q9BRQ3 303 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 A0A1W2PPV4 95 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MPPED1O15442 326 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MRPL19P49406 292 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 MAT1AQ00266 395 aaKnown RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEM52BQ4KMG9 183 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 PIGCQ92535 297 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 NAT6Q93015 286 aa13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
SCUBE1-202ENST00000360835 PAPPAQ13219 1627 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 MT-ATP6P00846 226 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 ACSM1Q08AH1 577 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 AVPI1Q5T686 147 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 CEBPZOSA8MTT3 80 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 SH2D5Q6ZV89 423 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEM200AQ86VY9 491 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 SULT1C4O75897 302 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF93P35789 620 aaPredicted RBP13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 ZNF74Q16587 644 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 TMEFF1Q8IYR6 380 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 CPT1CQ8TCG5 803 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 ANKRD9Q96BM1 317 aaPredicted RBP13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 SELENOIQ9C0D9 397 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 GPR55Q9Y2T6 319 aaPredicted RBP13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 MMACHCQ9Y4U1 282 aa13.52□□□□□ -0.24
SCUBE1-202ENST00000360835 GIPP09681 153 aaPredicted RBP13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 DUSP21Q9H596 190 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 DOCK5Q9H7D0 1870 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 CCDC88CQ9P219 2028 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 TMED7-TICAM2A0A0A6YYA0 188 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 OR6C65A6NJZ3 312 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 SELENOFO60613 162 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 TMUB2Q71RG4 321 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 MDGA2Q7Z553 956 aa13.52□□□□□ -0.25
SCUBE1-202ENST00000360835 OCSTAMPQ9BR26 566 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms