RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ROR2Q01974 943 aaKnown RBP16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 LGALS3BPQ08380 585 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 CCNIQ14094 377 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ACKR1Q16570 336 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZSCAN26Q16670 478 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MICAQ29983 383 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZER1Q7Z7L7 766 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 WFDC8Q8IUA0 241 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 ZNF433Q8N7K0 673 aaPredicted RBP16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 AQP11Q8NBQ7 271 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 OR10G2Q8NGC3 310 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 OR9Q2Q8NGE9 314 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 OR6X1Q8NH79 312 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 GIPC3Q8TF64 312 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 UTP4Q969X6 686 aaKnown RBP16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 MUCL1Q96DR8 90 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 SLC25A44Q96H78 314 aaPredicted RBP16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 DACH2Q96NX9 599 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 FUZQ9BT04 418 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 AP4S1Q9Y587 144 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HCFC1P51610 2035 aa16.9■□□□□ 0.3
HLA-DRB1-201ENST00000360004 HECTD1Q9ULT8 2610 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ZNF432O94892 652 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 EPXP11678 715 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 FCGR1AP12314 374 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 COX5AP20674 150 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CCKARP32238 428 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ACVR1BP36896 505 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 LIMS1P48059 325 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 RPS4XP62701 263 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 KPNB1Q14974 876 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 OR7E24Q6IFN5 339 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 PGBD2Q6P3X8 592 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SMARCD3Q6STE5 483 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 TMEM123Q8N131 208 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 PAPD5Q8NDF8 572 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 OR4C15Q8NGM1 316 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GTPBP3Q969Y2 492 aaKnown RBP16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 WFIKKN1Q96NZ8 548 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 KATNB1Q9BVA0 655 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 OR10A4Q9H209 315 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 TXNIPQ9H3M7 391 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 VNN3Q9NY84 501 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GRHPRQ9UBQ7 328 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 POFUT2Q9Y2G5 429 aa16.89■□□□□ 0.29
HLA-DRB1-201ENST00000360004 XKRYO14609 159 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NR2C1P13056 603 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 FASP25445 335 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 RPL27P61353 136 aaKnown RBP16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ERVK-25P63136 954 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CD47Q08722 323 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 TSPAN31Q12999 210 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CEACAM16Q2WEN9 425 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 FAM205BPQ63HN1 556 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 C1orf94Q6P1W5 598 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 C20orf196Q8IYI0 205 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 OR52L1Q8NGH7 329 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ASB10Q8WXI3 467 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 HSD17B8Q92506 261 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SLCO4A1Q96BD0 722 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 LRR1Q96L50 414 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ZNF556Q9HAH1 456 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CRLF2Q9HC73 371 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GPR35Q9HC97 309 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NGBQ9NPG2 151 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 PDP1Q9P0J1 537 aaPredicted RBP16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 KIF17Q9P2E2 1029 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 IL20RAQ9UHF4 553 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 MGAT4BQ9UQ53 548 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SIGLEC7Q9Y286 467 aa16.88■□□□□ 0.29
HLA-DRB1-201ENST00000360004 A6NIZ1 184 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CD14P08571 375 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ITGA5P08648 1049 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ACADSP16219 412 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GSTM3P21266 225 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SLC6A6P31641 620 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 RPS6KA3P51812 740 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 IST1P53990 364 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SH3BGRP55822 239 aaPredicted RBP16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 UBE2NP61088 152 aaKnown RBP16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ACTR3P61158 418 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 RAP1BP61224 184 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 RAP1AP62834 184 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 TMEM200AQ86VY9 491 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SYT14Q8NB59 555 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NOXO1Q8NFA2 376 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ZNF570Q96NI8 536 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 BDH2Q9BUT1 245 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 IFT27Q9BW83 186 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GLTPQ9NZD2 209 aa16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ZNF346Q9UL40 294 aaKnown RBP16.87■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NPIPB13A6NJU9 1138 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NPIPB4C9JG80 1138 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GASTP01350 101 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 TSPAN19P0C672 248 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 NOS3P29474 1203 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 SSTR2P30874 369 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 CAPZA2P47755 286 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 GSSP48637 474 aa16.86■□□□□ 0.29
HLA-DRB1-201ENST00000360004 ZNF84P51523 738 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms