RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 LNX2Q8N448 690 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 CNEP1R1Q8N9A8 125 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 SLC25A19Q9HC21 320 aa22.51■■□□□ 1.19
SSBP3-202ENST00000357475 NOSIPQ9Y314 301 aaKnown RBP22.51■■□□□ 1.19
SSBP3-202ENST00000357475 PCNX1Q96RV3 2341 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 HIVEP3Q5T1R4 2406 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 H7C1C5 153 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 ZNF432O94892 652 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 IL2RAP01589 272 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 HIST1H1CP16403 213 aaKnown RBP22.5■■□□□ 1.19
SSBP3-202ENST00000357475 SDHAP31040 664 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 ACVR1BP36896 505 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 VHLP40337 213 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 LCN6P62502 163 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 CAMK2DQ13557 499 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 TAF11Q15544 211 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 CARD17Q5XLA6 110 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 OR2A2Q6IF42 318 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 NIPAL3Q6P499 406 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 ATCAYQ86WG3 371 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 OR2M2Q96R28 347 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 FAM118AQ9NWS6 357 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 EMC3Q9P0I2 261 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 GRHPRQ9UBQ7 328 aa22.5■■□□□ 1.19
SSBP3-202ENST00000357475 GPR171O14626 319 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 CDH2P19022 906 aaPredicted RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 DAP3P51398 398 aaKnown RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 RPS6KA3P51812 740 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 MYBPC1Q00872 1141 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 TMEM201Q5SNT2 666 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 ZNF362Q5T0B9 420 aaPredicted RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 RIPPLY2Q5TAB7 128 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 CASP12Q6UXS9 341 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 PTCHD4Q6ZW05 846 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 FAM214BQ7L5A3 538 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 AAED1Q7RTV5 226 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 CCDC71Q8IV32 467 aaPredicted RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 TMEM123Q8N131 208 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 ARIH2OSQ8N7S6 290 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 OR4K13Q8NH42 304 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 HDAC2Q92769 488 aaKnown RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 TMEM45BQ96B21 275 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 TACO1Q9BSH4 297 aaKnown RBP22.49■■□□□ 1.19
SSBP3-202ENST00000357475 GP6Q9HCN6 339 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 GLRX2Q9NS18 164 aa22.49■■□□□ 1.19
SSBP3-202ENST00000357475 NPIPB13A6NJU9 1138 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 NPIPB4C9JG80 1138 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 ARPC3O15145 178 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 LRRTM2O43300 516 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 CLIC3O95833 236 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 TXNDC12O95881 172 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 CDKN2AP42771 156 aaKnown RBP22.48■■□□□ 1.19
SSBP3-202ENST00000357475 KRR1Q13601 381 aaKnown RBP22.48■■□□□ 1.19
SSBP3-202ENST00000357475 PHYHD1Q5SRE7 291 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 SLX4IPQ5VYV7 408 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 C12orf73Q69YU5 71 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 RDH12Q96NR8 316 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 NDEL1Q9GZM8 345 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 VCXQ9H320 206 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 ENOPH1Q9UHY7 261 aa22.48■■□□□ 1.19
SSBP3-202ENST00000357475 TRMUO75648 421 aaKnown RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 IGHV3-9P01782 118 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 APEHP13798 732 aaKnown RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 SMSP52788 366 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 ADORA2A-AS1P86434 159 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 BTLAQ7Z6A9 289 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 SYT14Q8NB59 555 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 SDR9C7Q8NEX9 313 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 OR52E2Q8NGJ4 325 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 OR6X1Q8NH79 312 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 CYGBQ8WWM9 190 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 UBE2FQ969M7 185 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 VCX3BQ9H321 246 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 TVP23BQ9NYZ1 205 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 NCOA6Q14686 2063 aaPredicted RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 ARHGEF9O43307 516 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 MRPL33O75394 65 aaKnown RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 NOS3P29474 1203 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 GRK5P34947 590 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 ADARB1P78563 741 aaKnown RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 C6orf52Q5T4I8 152 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 LIX1LQ8IVB5 337 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 STARD4Q96DR4 205 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 SLC25A44Q96H78 314 aaPredicted RBP22.47■■□□□ 1.19
SSBP3-202ENST00000357475 HRASLS5Q96KN8 279 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 NMNAT3Q96T66 252 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 FN3KQ9H479 309 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 PRSS50Q9UI38 385 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 RCE1Q9Y256 329 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 EMC9Q9Y3B6 208 aa22.47■■□□□ 1.19
SSBP3-202ENST00000357475 LOC100130705A0A1B0GUX0 176 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 ZNF726A6NNF4 738 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 SURF4O15260 269 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 UPK3AO75631 287 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 PGA4P0DJD7 388 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 PGA3P0DJD8 388 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 ACADSP16219 412 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.46■■□□□ 1.19
SSBP3-202ENST00000357475 GPR139Q6DWJ6 353 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 CYB561A3Q8NBI2 242 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms