RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 UNQ6494/PRO21346Q6UXR6 183 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 ESPNLQ6ZVH7 1005 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 PXKQ7Z7A4 578 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 ARIH2OSQ8N7S6 290 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 OR2V1Q8NHB1 315 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 ABHD17AQ96GS6 310 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 UCN2Q96RP3 112 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 EXOGQ9Y2C4 368 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 CHD8Q9HCK8 2581 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 AGFG1P52594 562 aaKnown RBP16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 CSNK2A1P68400 391 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 HSF1Q00613 529 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 MELKQ14680 651 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 HBMQ6B0K9 141 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 OR9Q1Q8NGQ5 310 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF420Q8TAQ5 688 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 KISS1RQ969F8 398 aaPredicted RBP16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 TEAD3Q99594 435 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 NMNAT2Q9BZQ4 307 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 HAO2Q9NYQ3 351 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 ERGIC3Q9Y282 383 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 PCDHGB7Q9Y5F8 929 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 BOD1L1Q8NFC6 3051 aa16.22■□□□□ 0.19
SMARCD3-202ENST00000356800 IGHV3-15A0A0B4J1V0 119 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 A0A1W2PRG6 482 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 CCDC182A6NF36 153 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 H7C1C5 153 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 WISP2O76076 250 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 PTHP01270 115 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 GYPBP06028 91 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 LCKP06239 509 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 IFNGR1P15260 489 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF708P17019 499 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF24P17028 368 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 CARD18P57730 90 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 RAC3P60763 192 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 LCN6P62502 163 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 CXADRP78310 365 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 POU3F1Q03052 451 aaPredicted RBP16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 LEG1Q6P5S2 330 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 B3GLCTQ6Y288 498 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 B3GNT6Q6ZMB0 384 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 EXD3Q8N9H8 876 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 PROKR2Q8NFJ6 384 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 OR10D3Q8NH80 312 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 NEIL3Q8TAT5 605 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 TXNDC15Q96J42 360 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 TAAR6Q96RI8 345 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 JAM3Q9BX67 310 aa16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 RSL24D1Q9UHA3 163 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-202ENST00000356800 CCDC160A6NGH7 325 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 NPIPB13A6NJU9 1138 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 NPIPB4C9JG80 1138 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 TFECO14948 347 aaPredicted RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 DNPH1O43598 174 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 CXCL13O43927 109 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 EIF1BO60739 113 aaKnown RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ENPP1P22413 925 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 PSMB9P28065 219 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ACVR1BP36896 505 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 RUNX1T1Q06455 604 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ASB18Q6ZVZ8 466 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC35D2Q76EJ3 337 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF367Q7RTV3 350 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 JAZF1Q86VZ6 243 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 CLVS1Q8IUQ0 354 aaPredicted RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNRF4Q8WWF5 429 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ASB10Q8WXI3 467 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 ABTB1Q969K4 478 aaPredicted RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 OXGR1Q96P68 337 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 DOK1Q99704 481 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 TSPAN10Q9H1Z9 355 aaPredicted RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 OR51V1Q9H2C8 321 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 MED29Q9NX70 200 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 TAS2R16Q9NYV7 291 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 SPRR3Q9UBC9 169 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 TP53TG5Q9Y2B4 290 aa16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 EXOSC1Q9Y3B2 195 aaKnown RBP16.21■□□□□ 0.18
SMARCD3-202ENST00000356800 TRGV5A0A0B4J1U4 118 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 LOC102725191A0A1B0GVB3 256 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 J3QRE1 110 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 SMAD9O15198 467 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 TRAF3IP2O43734 574 aaPredicted RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 APOL3O95236 402 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 IGHA1P01876 353 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 EIF1AXP47813 144 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC25A1P53007 311 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 KLHL12Q53G59 568 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 GPR107Q5VW38 600 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 VASNQ6EMK4 673 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 TMEM225Q6GV28 225 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 GPAT4Q86UL3 456 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 NANOGP1Q8N7R0 232 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 ZCCHC14Q8WYQ9 949 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF845Q96IR2 970 aaPredicted RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 COG8Q96MW5 612 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 MND1Q9BWT6 205 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 ASB6Q9NWX5 421 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms