RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RPL9P32969 192 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 HSD17B2P37059 387 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MAP3K8P41279 467 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CD151P48509 253 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACTA2P62736 377 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACTG2P63267 376 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACTC1P68032 377 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACTA1P68133 377 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 STK11Q15831 433 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP24-1Q3LI83 254 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC22A6Q4U2R8 563 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NHLRC3Q5JS37 347 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TWF2Q6IBS0 349 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FAHD2BQ6P2I3 314 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TCAIMQ8N3R3 496 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 BBS1Q8NFJ9 593 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR10G7Q8NGN6 311 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 HTR3CQ8WXA8 447 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NEIL2Q969S2 332 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CXorf40BQ96DE9 158 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FAHD2AQ96GK7 314 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CDX2Q99626 313 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SYT15Q9BQS2 421 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC30A2Q9BRI3 323 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 LLPHQ9BRT6 129 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 UPF3AQ9H1J1 476 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PARLQ9H300 379 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MOB1AQ9H8S9 216 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ELL3Q9HB65 397 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GMPPBQ9Y5P6 360 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KIAA1107Q9UPP5 1409 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TENM1Q9UKZ4 2725 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RALGAPA1Q6GYQ0 2036 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SMCO3A2RU48 225 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FAM231BA6NCW3 169 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PDHXO00330 501 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MTRF1O75570 445 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 AP2A1O95782 977 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CLIC3O95833 236 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR8U8P0C7N1 319 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CCNB1P14635 433 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FOLR1P15328 257 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KPNA2P52292 529 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 HMGCS2P54868 508 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM50BP56557 158 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RGS8P57771 180 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GSTO1P78417 241 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KLRC3Q07444 240 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RIPPLY1Q0D2K3 151 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 XRCC4Q13426 336 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CYBRD1Q53TN4 286 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 BEND3Q5T5X7 828 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 STOX1Q6ZVD7 989 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC16A14Q7RTX9 510 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FAM122BQ7Z309 247 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DCUN1D3Q8IWE4 304 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GABRG1Q8N1C3 465 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC22A18ASQ8N1D0 253 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 METTL4Q8N3J2 472 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DHRSXQ8N5I4 330 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TRAM1L1Q8N609 369 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MDS2Q8NDY4 140 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PROKR2Q8NFJ6 384 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR51L1Q8NGJ5 315 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC7A13Q8TCU3 470 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ASZ1Q8WWH4 475 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM190Q8WZ59 177 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NDRG1Q92597 394 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MYDGFQ969H8 173 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 APH1AQ96BI3 265 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MED8Q96G25 268 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TSSK3Q96PN8 268 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MCCC1Q96RQ3 725 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FAIM2Q9BWQ8 316 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 XKR8Q9H6D3 395 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CHRAC1Q9NRG0 131 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 B3GNT2Q9NY97 397 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 IKZF2Q9UKS7 526 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 EIF3LQ9Y262 564 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 L3MBTL1Q9Y468 752 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PEX16Q9Y5Y5 336 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 AUP1Q9Y679 476 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TOGARAM1Q9Y4F4 1720 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MROH7-TTC4A0A0A0MT08 1334 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MROH7Q68CQ1 1323 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IGHV3OR16-12A0A075B7B8 117 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IGHV3-16A0A0C4DH30 117 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PCP4L1A6NKN8 68 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IDSB3KWA1 339 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SULT2B1O00204 365 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 HIP1O00291 1037 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IDH3BO43837 385 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 BRI3O95415 125 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CD160O95971 181 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IFNW1P05000 195 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TPM3P06753 285 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 DPEP1P16444 411 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF26P17031 533 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINA2P20848 420 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms