RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 AMIGO3Q86WK7 504 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 THNSL2Q86YJ6 484 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF439Q8NDP4 499 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR2T27Q8NH04 317 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 GRHL3Q8TE85 626 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FAM216AQ8WUB2 273 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CDS1Q92903 461 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ECHDC3Q96DC8 303 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 GNPNAT1Q96EK6 184 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 MS4A10Q96PG2 267 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FIZ1Q96SL8 496 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 HCAR1Q9BXC0 346 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TDP1Q9NUW8 608 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 TRAV1-2A0A0B4J238 106 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 IGKV6D-41A0A0C4DH26 115 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TRBV4-1A0A0J9YWV2 114 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM238LA0A1B0GVL6 79 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 GPR37O15354 613 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PLA2G10O15496 165 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FZD6O60353 706 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TBPP20226 339 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SIRPAP78324 504 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TEAD2Q15562 447 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CEBPEQ15744 281 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PHYHD1Q5SRE7 291 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF385CQ66K41 422 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 GDPD4Q6W3E5 623 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MAMDC2Q7Z304 686 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 NRMQ8IXM6 262 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SLC43A2Q8N370 569 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR13C9Q8NGT0 318 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 NDRG1Q92597 394 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 RAB8BQ92930 207 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM38AQ9H6F2 299 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 UBQLN4Q9NRR5 601 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM184BQ9Y519 407 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 COL1A2P08123 1366 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF724A8MTY0 619 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 NPIPB9F8W1W9 429 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SAP18O00422 153 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 KNG1P01042 644 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 GP1BAP07359 652 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CASRP41180 1078 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 RAB28P51157 221 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 HSF1Q00613 529 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ELAVL2Q12926 359 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 GUCA2BQ16661 112 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PODNL1Q6PEZ8 512 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 C19orf35Q6ZS72 473 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF808Q8N4W9 903 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 NCDNQ9UBB6 729 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 STEAP1Q9UHE8 339 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MDFIC2A0A1B0GVS7 189 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 NME2P1O60361 137 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 DIRAS3O95661 229 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TAL1P17542 331 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 GNRHRP30968 328 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FHITP49789 147 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 BACE1P56817 501 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 KCNAB1Q14722 419 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MS4A13Q5J8X5 152 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 RNLSQ5VYX0 342 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMIGD1Q6UXZ0 262 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ABI3BPQ7Z7G0 1075 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 EXD3Q8N9H8 876 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FBXO22Q8NEZ5 403 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 GPX8Q8TED1 209 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SAMD8Q96LT4 415 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SGPP1Q9BX95 441 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TTTY10Q9BZA0 68 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SLC25A18Q9H1K4 315 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR51I2Q9H344 312 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 RRAGCQ9HB90 399 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FGF20Q9NP95 211 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 PRDM7Q9NQW5 492 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM100Q9NV29 134 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PLSCR5A0PG75 271 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 RAD51DO75771 328 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PDGFBP01127 241 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 LINC00614P0C842 121 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 RAB11AP62491 216 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PPIAP62937 165 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 CSNK2A1P68400 391 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 FAM189BP81408 668 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ELOCQ15369 112 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 LCN10Q6JVE6 187 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF321PQ8N8H1 164 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CSNK2A3Q8NEV1 391 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MRPS24Q96EL2 167 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZDHHC6Q9H6R6 413 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 LPAR3Q9UBY5 353 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 DDTLA6NHG4 134 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 CASTOR2A6NHX0 329 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM212A6NML5 194 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CDRT15L2A8MXV6 281 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MSTNO14793 375 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CTDSPLO15194 276 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms