RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 TSPAN2O60636 221 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 WISP1O95388 367 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 GPANK1O95872 356 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 DPP4P27487 766 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 SOX2P48431 317 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 Q499Y3 187 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 FCRLAQ7L513 359 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 LINGO2Q7L985 606 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 PLCZ1Q86YW0 608 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 PHF21AQ96BD5 680 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 SLC25A38Q96DW6 304 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 FOXQ1Q9C009 403 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 WWTR1Q9GZV5 400 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 TCF7L1Q9HCS4 588 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 CACNA1CQ13936 2221 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 C11orf98E9PRG8 122 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 BGLAPP02818 100 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 SDHBP21912 280 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 GDNFP39905 211 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 SNTB2Q13425 540 aaKnown RBP19.74■□□□□ 0.75
SHMT1-202ENST00000352886 KLF9Q13886 244 aaPredicted RBP19.74■□□□□ 0.75
SHMT1-202ENST00000352886 ARHGAP40Q5TG30 622 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 EEF1A1P5Q5VTE0 462 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 GPR139Q6DWJ6 353 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 STAC2Q6ZMT1 411 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 PLXDC1Q8IUK5 500 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 PM20D2Q8IYS1 436 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 SDR16C5Q8N3Y7 309 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 GCDHQ92947 438 aaPredicted RBP19.74■□□□□ 0.75
SHMT1-202ENST00000352886 OMA1Q96E52 524 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 TRAF4Q9BUZ4 470 aaPredicted RBP19.74■□□□□ 0.75
SHMT1-202ENST00000352886 GON7Q9BXV9 100 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 COPZ2Q9P299 210 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 COPS7AQ9UBW8 275 aa19.74■□□□□ 0.75
SHMT1-202ENST00000352886 ALG1L2C9J202 215 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 SERPINA12Q8IW75 414 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 D2HGDHQ8N465 521 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 C1orf216Q8TAB5 229 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 TAS2R5Q9NYW4 299 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 MKL2Q9ULH7 1088 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 CENPBD1B2RD01 187 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 DUX1O43812 170 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 SLC25A12O75746 678 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 MYF5P13349 255 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 STOMP27105 288 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 ABCD3P28288 659 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 LCN1P31025 176 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 CSF2RBP32927 897 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 ARPC4P59998 168 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 BTBD16Q32M84 506 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 THEM6Q8WUY1 208 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 SLC25A36Q96CQ1 311 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 KLHL15Q96M94 604 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 DPYSL5Q9BPU6 564 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 C7orf50Q9BRJ6 194 aaKnown RBP19.73■□□□□ 0.75
SHMT1-202ENST00000352886 SLITRK2Q9H156 845 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 PCED1AQ9H1Q7 454 aa19.73■□□□□ 0.75
SHMT1-202ENST00000352886 TRAV36DV7A0A075B6V5 113 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 A0A1W2PQD3 144 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 CDC40O60508 579 aaKnown RBP eCLIP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 PGCP20142 388 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 ALOX5APP20292 161 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 MAPK3P27361 379 aaPredicted RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 SNRPD2P62316 118 aaKnown RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 SMUG1Q53HV7 270 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 STPG1Q5TH74 334 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 SLC22A10Q63ZE4 541 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 SLC29A4Q7RTT9 530 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 OR1N1Q8NGS0 311 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 GRPEL2Q8TAA5 225 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 INTS14Q96SY0 518 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 VN1R1Q9GZP7 353 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 TO15178 435 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 NUDT21O43809 227 aaKnown RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 EIF4E2O60573 245 aaKnown RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 PLGP00747 810 aaPredicted RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 DYRK1AQ13627 763 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 CHRDL2Q6WN34 429 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 OR11H7Q8NGC8 314 aa19.72■□□□□ 0.75
SHMT1-202ENST00000352886 MRPL15Q9P015 296 aaKnown RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 ING1Q9UK53 422 aaPredicted RBP19.72■□□□□ 0.75
SHMT1-202ENST00000352886 FABP7O15540 132 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 AKR7A2O43488 359 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 ZNF780AO75290 641 aaPredicted RBP19.71■□□□□ 0.75
SHMT1-202ENST00000352886 GP1BBP13224 206 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 OR2G2Q8NGZ5 317 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 DEDD2Q8WXF8 326 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 NSMAFQ92636 917 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 OR51J1Q9H342 316 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 OR5V1Q9UGF6 321 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 TRBV5-5A0A0J9YX44 114 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 XKRYO14609 159 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 ADRA2CP18825 462 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 EGR3Q06889 387 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 OTPQ5XKR4 325 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 LAMTOR1Q6IAA8 161 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 LANCL3Q6ZV70 420 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 MAMDC2Q7Z304 686 aaPredicted RBP19.71■□□□□ 0.75
SHMT1-202ENST00000352886 CARFQ8N187 725 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms