RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RYDENQ9NUL5 291 aaKnown RBP7.4□□□□□ -1.22
CD44-205ENST00000352818 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 PEX16Q9Y5Y5 336 aa7.4□□□□□ -1.22
CD44-205ENST00000352818 DOCK10Q96BY6 2186 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 A0A1B0GVG6 124 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 GTPBP1O00178 669 aaKnown RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 IMPA2O14732 288 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 OIP5O43482 229 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 PPP1R3DO95685 299 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 TXNDC12O95881 172 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 IL1AP01583 271 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 UMODP07911 640 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 BMP4P12644 408 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 CD53P19397 219 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 PGCP20142 388 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ABCD3P28288 659 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 UQCRC1P31930 480 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SUMO3P55854 103 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 TAS2R43P59537 309 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ACTC1P68032 377 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ACTA1P68133 377 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 KRTAP1-1Q07627 177 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ITGADQ13349 1161 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 EFR3AQ14156 821 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 GALEQ14376 348 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SSPNQ14714 243 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ZNF74Q16587 644 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 NDUFAF6Q330K2 333 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SLC35D3Q5M8T2 416 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 OR2G6Q5TZ20 316 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 LCN1P1Q5VSP4 162 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 LIPKQ5VXJ0 399 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 PLBD1Q6P4A8 553 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 C16orf87Q6PH81 154 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ZNF322Q6U7Q0 402 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 TMEM205Q6UW68 189 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 APOOLQ6UXV4 268 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 TMPRSS11AQ6ZMR5 421 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 C3P1Q6ZMU1 363 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 Q6ZNX1 250 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 OVCH1Q7RTY7 1134 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 CDC20BQ86Y33 519 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 GPALPP1Q8IXQ4 340 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 TMCO5AQ8N6Q1 288 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SIRT6Q8N6T7 355 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 POMGNT2Q8NAT1 580 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SLC37A3Q8NCC5 494 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 OR51A7Q8NH64 312 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 CA5BP1Q8WTZ4 195 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 CHPT1Q8WUD6 406 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 OMA1Q96E52 524 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 TNFRSF13CQ96RJ3 184 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 GAL3ST4Q96RP7 486 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ASPNQ9BXN1 380 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SLC7A5P2Q9GIP4 190 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 WDR54Q9H977 334 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 NRIP3Q9NQ35 241 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 TBCCD1Q9NVR7 557 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 ASB6Q9NWX5 421 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 CRNNQ9UBG3 495 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 NXT1Q9UKK6 140 aaKnown RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 CARD8Q9Y2G2 431 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 HIF3AQ9Y2N7 669 aa7.39□□□□□ -1.23
CD44-205ENST00000352818 SPIN1Q9Y657 262 aaPredicted RBP7.39□□□□□ -1.23
CD44-205ENST00000352818 IQCMA0A1B0GVH7 501 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 TRDV1A0A1B0GX56 115 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 IDSB3KWA1 339 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 MCIDASD6RGH6 385 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 J3QRK9 145 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SMAD7O15105 426 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 PHF1O43189 567 aaPredicted RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 FADS1O60427 444 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 REM1O75628 298 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SULT1C4O75897 302 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 KLK3P07288 261 aaPredicted RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 HEXBP07686 556 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SBK2P0C263 348 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ASAH2BP0C7U1 165 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 NAGAP17050 411 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 PTNP21246 168 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 EVI2BP34910 448 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 P2RX1P51575 399 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 NR0B1P51843 470 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 SLC25A1P53007 311 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 PPP5CP53041 499 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 NRG3P56975 720 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SLC26A5P58743 744 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 RPS3AP61247 264 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 RNF4P78317 190 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 PMP22Q01453 160 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ZNF45Q02386 682 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ZNF117Q03924 483 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 LGALS3BPQ08380 585 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 MYBPHQ13203 477 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms