RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 S100PBPQ96BU1 408 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 MED18Q9BUE0 208 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 FNDC11Q9BVV2 318 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 ACTR6Q9GZN1 396 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 CACYBPQ9HB71 228 aaKnown RBP14.2□□□□□ -0.14
RAB5C-201ENST00000346213 SLC24A3Q9HC58 644 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 SERINC1Q9NRX5 453 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 BLOC1S6Q9UL45 172 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 F8P00451 2351 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 LIPT2A6NK58 231 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 ATE1O95260 518 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 GASTP01350 101 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 OR3A2P47893 321 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 OR2B6P58173 313 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 PAMR1Q6UXH9 720 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 KRTAP1-3Q8IUG1 177 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 WDFY1Q8IWB7 410 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 ZIC4Q8N9L1 334 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 AQP11Q8NBQ7 271 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 PIK3IP1Q96FE7 263 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 TIGARQ9NQ88 270 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 HDGFL3Q9Y3E1 203 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 SH3PXD2BA1X283 911 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 SLC1A7O00341 560 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 ZNF208O43345 1280 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 LYZL6O75951 148 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 THY1P04216 161 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 PSMB1P20618 241 aaKnown RBP14.19□□□□□ -0.14
RAB5C-201ENST00000346213 IGHV1-2P23083 117 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 GGT2P36268 569 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 ESRRGP62508 458 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 MAD2L1BPQ15013 274 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-201ENST00000346213 SEC23BQ15437 767 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 TMEM201Q5SNT2 666 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 ZNF773Q6PK81 442 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 SLC43A2Q8N370 569 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 TMEM99Q8N816 258 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 SLC7A13Q8TCU3 470 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 DGCR6LQ9BY27 220 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 MAN2C1Q9NTJ4 1040 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 KLHL9Q9P2J3 617 aa14.19□□□□□ -0.14
RAB5C-201ENST00000346213 RAI1Q7Z5J4 1906 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-201ENST00000346213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 FTCDNL1E5RQL4 147 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 AKR7A3O95154 331 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 CD53P19397 219 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 SLC16A1P53985 500 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 LGALS3BPQ08380 585 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 WBP2NLQ6ICG8 309 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 CNIH3Q8TBE1 160 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 ZFAND2BQ8WV99 257 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 GTPBP3Q969Y2 492 aaKnown RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 DGCR14Q96DF8 476 aaKnown RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 KTI12Q96EK9 354 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 ZNF385AQ96PM9 386 aaKnown RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 RBM38Q9H0Z9 239 aaKnown RBP14.18□□□□□ -0.14
RAB5C-201ENST00000346213 ANKRD19PQ9H560 264 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 EVA1AQ9H8M9 152 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 GP6Q9HCN6 339 aa14.18□□□□□ -0.14
RAB5C-201ENST00000346213 A0A1B0GWA3 101 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 OR10H3O60404 316 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 LYPD3O95274 346 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 IFNA8P32881 189 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 ART1P52961 327 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 RGS8P57771 180 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 CSNK2A1P68400 391 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 SLC17A1Q14916 467 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 OR7A5Q15622 319 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 TAB1Q15750 504 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 SFRP5Q5T4F7 317 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 PGBD2Q6P3X8 592 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 PODNL1Q6PEZ8 512 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 KLHL17Q6TDP4 642 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 BEND4Q6ZU67 534 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 LILRB1Q8NHL6 650 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 CXXC4Q9H2H0 198 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 NPAP1Q9NZP6 1156 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 NDRG3Q9UGV2 375 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 FLVCR1Q9Y5Y0 555 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 PRRC2AP48634 2157 aaKnown RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 ITPR3Q14573 2671 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 ENO4A6NNW6 628 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 COX5AP20674 150 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 EEF1B2P24534 225 aaKnown RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 HTR3AP46098 478 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 CRISP1P54107 249 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 UGT2B15P54855 530 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 TAS2R41P59536 307 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 ST3GAL3Q11203 375 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 TRAM2Q15035 370 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 CD300LDQ6UXZ3 194 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 WDR88Q6ZMY6 472 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 WFDC8Q8IUA0 241 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 POLR2J2Q9GZM3 115 aaKnown RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 POLR2J3Q9H1A7 115 aaKnown RBP14.17□□□□□ -0.14
RAB5C-201ENST00000346213 REV1Q9UBZ9 1251 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 TRAPPC4Q9Y296 219 aa14.17□□□□□ -0.14
RAB5C-201ENST00000346213 TPRKBQ9Y3C4 175 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms