RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OR2C1O95371 312 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 PMP2P02689 132 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 TK1P04183 234 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 PTOV1Q86YD1 416 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 SGK3Q96BR1 496 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 ZNF578Q96N58 590 aaPredicted RBP16.13■□□□□ 0.17
SPAST-202ENST00000345662 RNF32Q9H0A6 362 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 TP53TG5Q9Y2B4 290 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 PRAMEF27A3QJZ7 478 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 TAAR5O14804 337 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 GLCEO94923 617 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 RFX2P48378 723 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 REEP5Q00765 189 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 PRAMEF9Q5VWM5 478 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 KIAA0907Q7Z7F0 614 aaPredicted RBP16.13■□□□□ 0.17
SPAST-202ENST00000345662 LSMEM1Q8N8F7 131 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 MFSD9Q8NBP5 474 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 PLPP7Q8NBV4 271 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 OR2AK2Q8NG84 335 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 CXCL16Q9H2A7 254 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 GMEB2Q9UKD1 530 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 VDAC3Q9Y277 283 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 RPP30P78346 268 aaKnown RBP16.13■□□□□ 0.17
SPAST-202ENST00000345662 RFLNAQ6ZTI6 216 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 ZNF561Q8N587 486 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 CHRDQ9H2X0 955 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 APOBEC3BQ9UH17 382 aaKnown RBP16.13■□□□□ 0.17
SPAST-202ENST00000345662 LTBP3Q9NS15 1303 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 NUMA1Q14980 2115 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 NPPBP16860 134 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 SRPXP78539 464 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 CLINT1Q14677 625 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 NKG7Q16617 165 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 C1orf87Q8N0U7 546 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 WDFY2Q96P53 400 aa16.13■□□□□ 0.17
SPAST-202ENST00000345662 HEPACAM2A8MVW5 462 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 RGS13O14921 159 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 SELENOFO60613 162 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 EPHA5P54756 1037 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 LTB4RQ15722 352 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 HNRNPA1L2Q32P51 320 aaKnown RBP16.12■□□□□ 0.17
SPAST-202ENST00000345662 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 OR9A4Q8NGU2 314 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 OR5B2Q96R09 309 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 TMEM231Q9H6L2 316 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 SLC25A19Q9HC21 320 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 FGF20Q9NP95 211 aaPredicted RBP16.12■□□□□ 0.17
SPAST-202ENST00000345662 PLEKHM1Q9Y4G2 1056 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 H7C1Q1 480 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 AIPO00170 330 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 LAP3P28838 519 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 ZNF542PQ5EBM4 170 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 OR5M10Q6IEU7 315 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 ZNF620Q6ZNG0 422 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 ESPNLQ6ZVH7 1005 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 CDCP1Q9H5V8 836 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 TAAR2Q9P1P5 351 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 FOLR1P15328 257 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 RAB4AP20338 218 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 SFTPDP35247 375 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 OR10A3P58181 314 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 IHHQ14623 411 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 MEP1BQ16820 701 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 OPN5Q6U736 354 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 CMTM4Q8IZR5 234 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 PRR18Q8N4B5 295 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 METTL9Q9H1A3 318 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 LDAHQ9H6V9 325 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 NPY4RP50391 375 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 POU3F1Q03052 451 aaPredicted RBP16.12■□□□□ 0.17
SPAST-202ENST00000345662 GLYR1Q49A26 553 aaPredicted RBP16.12■□□□□ 0.17
SPAST-202ENST00000345662 APH1BQ8WW43 257 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 ASB13Q8WXK3 278 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 LPAR4Q99677 370 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 APOOQ9BUR5 198 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 SPACA1Q9HBV2 294 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 ACOXLQ9NUZ1 547 aa16.12■□□□□ 0.17
SPAST-202ENST00000345662 BLVRBP30043 206 aaPredicted RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 UBE2MP61081 183 aaKnown RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 TAS2R5Q9NYW4 299 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 SLC5A10A0PJK1 596 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 PEX12O00623 359 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ZNF264O43296 627 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 DUX1O43812 170 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 CD14P08571 375 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 OR2B8PP59922 312 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 TCTN3Q6NUS6 607 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ZNF836Q6ZNA1 936 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ZNF761Q86XN6 746 aaPredicted RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 TIMM29Q9BSF4 260 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 HMGN4O00479 90 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 APEHP13798 732 aaKnown RBP16.11■□□□□ 0.17
SPAST-202ENST00000345662 PSMB6P28072 239 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 ECI1P42126 302 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 FAM111BQ6SJ93 734 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 GABRG1Q8N1C3 465 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 OR14L1PQ8NHC6 308 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 UPRTQ96BW1 309 aa16.11■□□□□ 0.17
SPAST-202ENST00000345662 STARD5Q9NSY2 213 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms