RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 H3F3AP84243 136 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 EXOSC7Q15024 291 aaKnown RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 MPEG1Q2M385 716 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 HSD11B1LQ7Z5J1 315 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 GCDHQ92947 438 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 CXorf58Q96LI9 332 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 OR1F2PQ96R84 312 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SLC22A7Q9Y694 548 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LAMB4A4D0S4 1761 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 C20orf202A1L168 122 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PRAMEF27A3QJZ7 478 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 AQP8O94778 261 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 GATMP50440 423 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PRAMEF9Q5VWM5 478 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF776Q68DI1 518 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TBC1D20Q96BZ9 403 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LINC00862A6NCI5 91 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TARM1B6A8C7 271 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SELENOFO60613 162 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 RIN1Q13671 783 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LINC00303Q3SY05 128 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 UEVLDQ8IX04 471 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM156Q8N614 296 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SEMA6DQ8NFY4 1073 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SGK3Q96BR1 496 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 MOKQ9UQ07 419 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 DOK2O60496 412 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LILRB3O75022 631 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LDB3O75112 727 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 F10P00742 488 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 FABP6P51161 128 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SP3Q02447 781 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 FJX1Q86VR8 437 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SMIM4Q8WVI0 70 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 RTP3Q9BQQ7 232 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 LMF2Q9BU23 707 aaKnown RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 HINT3Q9NQE9 182 aaKnown RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 ASB1Q9Y576 335 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 KDM3BQ7LBC6 1761 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 RNASEK-C17orf49H0YIS7 233 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 TRAPPC6AO75865 159 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SLC2A10O95528 541 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 HPNP05981 417 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 FGF7P21781 194 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 MMP15P51511 669 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 MARCH8Q5T0T0 291 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 OGFOD3Q6PK18 319 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 FBXL6Q8N531 539 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SCLYQ96I15 445 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 MS4A7Q9GZW8 240 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 ANKRD19PQ9H560 264 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 PRSS16Q9NQE7 514 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SPHK2Q9NRA0 654 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 TCRBV16S1A1N1A0A5B0 115 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 IGLON5A6NGN9 336 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 H7BYZ3 331 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 THBS1P07996 1170 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 HOXB9P17482 250 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 NFYBP25208 207 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 GDI1P31150 447 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SUOXP51687 545 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 POLR2HP52434 150 aaKnown RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 PLP2Q04941 152 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SCGB2A2Q13296 93 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 HNF4GQ14541 408 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 VAMP3Q15836 100 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 OTUD1Q5VV17 481 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 C9orf62Q8N4C0 152 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 C8orf33Q9H7E9 229 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 KLK11Q9UBX7 282 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 CD37P11049 281 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 ITGB7P26010 798 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SFRP5Q5T4F7 317 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 RPUSD3Q6P087 351 aaKnown RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 FIGLAQ6QHK4 219 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 NAXDQ8IW45 347 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 OR1E3Q8WZA6 343 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 EVA1AQ9H8M9 152 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 WDR76Q9H967 626 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 CYSLTR2Q9NS75 346 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 A0A087WV62 115 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-202ENST00000345356 SMIM6P0DI80 62 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 PCBP4P57723 403 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms