RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR6N1Q8NGY5 312 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 OR6X1Q8NH79 312 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 GIPC3Q8TF64 312 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 STMN2Q93045 179 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 KISS1RQ969F8 398 aaPredicted RBP10.47□□□□□ -0.73
SNCA-202ENST00000345009 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 NRBF2Q96F24 287 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 SLC25A44Q96H78 314 aaPredicted RBP10.47□□□□□ -0.73
SNCA-202ENST00000345009 LRR1Q96L50 414 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 TNFRSF13CQ96RJ3 184 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 SPOCK3Q9BQ16 436 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 ENKD1Q9H0I2 346 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 OR10A4Q9H209 315 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 ZNF556Q9HAH1 456 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 MCCC2Q9HCC0 563 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 MALT1Q9UDY8 824 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 MGAT4BQ9UQ53 548 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 FREM1Q5H8C1 2179 aa10.47□□□□□ -0.73
SNCA-202ENST00000345009 TRAV27A0A087WT01 109 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 CIB4A0PJX0 185 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SLC35F4A4IF30 521 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 ARRDC5A6NEK1 342 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 A6NIZ1 184 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 CENPBD1B2RD01 187 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 NPIPB4C9JG80 1138 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 ENTPD5O75356 428 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TIPRLO75663 272 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 IGHG1P01857 330 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 F13BP05160 661 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TSPAN19P0C672 248 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 HLA-DOBP13765 273 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 PSMB1P20618 241 aaKnown RBP10.46□□□□□ -0.73
SNCA-202ENST00000345009 FUT4P22083 530 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 KIR2DL3P43628 341 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SELENOPP49908 381 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SH3BGRP55822 239 aaPredicted RBP10.46□□□□□ -0.73
SNCA-202ENST00000345009 BIDP55957 195 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 CTXN1P60606 82 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 RAP1BP61224 184 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 RPS4XP62701 263 aaKnown RBP10.46□□□□□ -0.73
SNCA-202ENST00000345009 RAP1AP62834 184 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 FAM27E3Q08E93 113 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 FAPQ12884 760 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 COX10Q12887 443 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TSPAN31Q12999 210 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 ATP6AP1Q15904 470 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SFRP5Q5T4F7 317 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 C1QTNF12Q5T7M4 302 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SMARCD3Q6STE5 483 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 MEX3BQ6ZN04 569 aaKnown RBP10.46□□□□□ -0.73
SNCA-202ENST00000345009 P2RY8Q86VZ1 359 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 GABRG1Q8N1C3 465 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 AQP11Q8NBQ7 271 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 OR10G2Q8NGC3 310 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 OR4C15Q8NGM1 316 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 OR13C2Q8NGS9 318 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 FNDC8Q8TC99 324 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TXNDC15Q96J42 360 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 OR2M2Q96R28 347 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TXNIPQ9H3M7 391 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 MED29Q9NX70 200 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 TAS2R16Q9NYV7 291 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 GRHPRQ9UBQ7 328 aa10.46□□□□□ -0.73
SNCA-202ENST00000345009 XKRYO14609 159 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 CDC42EP2O14613 210 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 PTP4A3O75365 173 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 ZNF432O94892 652 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 GASTP01350 101 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 CD14P08571 375 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 ANXA8P13928 327 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 MPGP29372 298 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 HOXC12P31275 282 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 SLC6A6P31641 620 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 NTF4P34130 210 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 CSNK1A1P48729 337 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 RPS6KA3P51812 740 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 CLRN1P58418 232 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 RPL27P61353 136 aaKnown RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 ACKR1Q16570 336 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 TSPO2Q5TGU0 170 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 GPR139Q6DWJ6 353 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 PGBD2Q6P3X8 592 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 STAC2Q6ZMT1 411 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 DPY19L2P2Q6ZN68 376 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 BHLHA15Q7RTS1 189 aaPredicted RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 CXorf67Q86X51 503 aaPredicted RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 MEX3DQ86XN8 651 aaKnown RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 HIPK1Q86Z02 1210 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 C20orf196Q8IYI0 205 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 PLPP7Q8NBV4 271 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 OR52L1Q8NGH7 329 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 MOSPD2Q8NHP6 518 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 FAM222BQ8WU58 562 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 MUCL1Q96DR8 90 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 DACH2Q96NX9 599 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms