RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RND1Q92730 232 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 UBE2FQ969M7 185 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 HRASLS5Q96KN8 279 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MGLLQ99685 303 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TMPRSS13Q9BYE2 586 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 UTS2RQ9UKP6 389 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF281Q9Y2X9 895 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 FIS1Q9Y3D6 152 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 A0A1B0GW55 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 PPIHO43447 177 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 KLHL18O94889 574 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 IL2RAP01589 272 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 IGHV2-5P01817 119 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SCG5P05408 212 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L2P0CJ85 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L3P0CJ86 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L4P0CJ87 422 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L5P0CJ88 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L6P0CJ89 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4L7P0CJ90 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CD8BP10966 210 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 FKBP2P26885 142 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GLRBP48167 497 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 KHKP50053 298 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GNG10P50151 68 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 EMP2P54851 167 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 NUTF2P61970 127 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 REEP5Q00765 189 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SPIN4Q56A73 249 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 TGIF2LXQ8IUE1 241 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SPAG16Q8N0X2 631 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 LRRC25Q8N386 305 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 OR56A3Q8NH54 315 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DTD1Q8TEA8 209 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ORAI1Q96D31 301 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GABARAPL3Q9BY60 117 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 OPN3Q9H1Y3 402 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ANKRA2Q9H9E1 313 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ADAP2Q9NPF8 381 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 KCNJ16Q9NPI9 418 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 MS4A12Q9NXJ0 267 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DHCR7Q9UBM7 475 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 DUX4Q9UBX2 424 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SH3BGRL2Q9UJC5 107 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 MRTO4Q9UKD2 239 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 RUVBL1Q9Y265 456 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 PLEKHA6Q9Y2H5 1048 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 NUBP2Q9Y5Y2 271 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 FER1L5A0AVI2 2057 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 C2orf92A0A1B0GVN3 265 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ISM1B1AKI9 464 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 E9PI62 339 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 UBFD1O14562 309 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 FFAR3O14843 346 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SIGLEC5O15389 551 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GPR42O15529 346 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SLC22A3O75751 556 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CSTBP04080 98 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 MYF5P13349 255 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ST6GAL1P15907 406 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CBR1P16152 277 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GABRB1P18505 474 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ANXA7P20073 488 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 NPR2P20594 1047 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CCL11P51671 97 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 RAG2P55895 527 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CLDN6P56747 220 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 SLC26A5P58743 744 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 GPR176Q14439 515 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 OPN5Q6U736 354 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM135Q86UB9 458 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 NAA40Q86UY6 237 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 KRTAP1-3Q8IUG1 177 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 CNOT9Q92600 299 aaKnown RBP6.62□□□□□ -1.35
ZNF540-202ENST00000343599 KAT2AQ92830 837 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 FCRL1Q96LA6 429 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 VNN3Q9NY84 501 aa6.62□□□□□ -1.35
ZNF540-202ENST00000343599 ZCWPW2A0A1B0GU75 182 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 K7EM74 188 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ICOSLGO75144 302 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 MED6O75586 246 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 KRT33AO76009 404 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 FGF4P08620 206 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ANXA8P13928 327 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 EPHA2P29317 976 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 BTCP35070 178 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 KIR3DL2P43630 455 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 CASP9P55211 416 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ZP1P60852 638 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 TGM3Q08188 693 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-202ENST00000343599 PCID2Q5JVF3 399 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ANXA8L1Q5VT79 327 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 LIPNQ5VXI9 398 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF787Q6DD87 383 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 MISPQ8IVT2 679 aa6.61□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF441Q8N8Z8 693 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms