RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DPP4P27487 766 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 GNG10P50151 68 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 MEOX1P50221 254 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR4D1Q15615 310 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF789Q5FWF6 425 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 VITQ6UXI7 678 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PDZD3Q86UT5 571 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PRR18Q8N4B5 295 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR2AE1Q8NHA4 323 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PLK3Q9H4B4 646 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 IL17BQ9UHF5 180 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 FZD10Q9ULW2 581 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SNRPGP15A8MWD9 76 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 DUSP11O75319 330 aaKnown RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 ENTPD3O75355 529 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CBR3O75828 277 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 Q5PR19 223 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 LRRC25Q8N386 305 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR5M3Q8NGP4 307 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 DNAJC19Q96DA6 116 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 DTD2Q96FN9 168 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 BMFQ96LC9 184 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SEC11CQ9BY50 192 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PBX4Q9BYU1 374 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 LHX6Q9UPM6 363 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NSG2Q9Y328 171 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 PCDHA9Q9Y5H5 950 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF98A6NK75 572 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 C2CD4BA6NLJ0 364 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SYT5O00445 386 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TGFB1I1O43294 461 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR2J2O76002 312 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 INSRRP14616 1297 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TIA1P31483 386 aaKnown RBP eCLIP5.75□□□□□ -1.49
VCAN-203ENST00000343200 SOX10P56693 466 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 SLC35A1P78382 337 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 ZNF91Q05481 1191 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 REM2Q8IYK8 340 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM123Q8N131 208 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM163Q8TC26 289 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 MCHR2Q969V1 340 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM125Q96AQ2 219 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NUS1Q96E22 293 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 INPP5KQ9BT40 448 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TMEM59Q9BXS4 323 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 GALNT9Q9HCQ5 603 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TLR9Q9NR96 1032 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NECAP2Q9NVZ3 263 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 RAD1O60671 282 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TUSC2O75896 110 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 CSTAP01040 98 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 FHITP49789 147 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 RAC1P63000 192 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 EXT1Q16394 746 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 RNASEKQ6P5S7 137 aaKnown RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 C6orf201Q7Z4U5 140 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 OR6K2Q8NGY2 324 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 IL1F10Q8WWZ1 152 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 TINAGL1Q9GZM7 467 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 RAB6CQ9H0N0 254 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 NCOR1P1Q9H4R4 102 aa5.75□□□□□ -1.49
VCAN-203ENST00000343200 C19orf25Q9UFG5 118 aaPredicted RBP5.75□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3DA0A087WVF3 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3IA0A087WXS9 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3EA0A087X179 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3KA0A087X1G2 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3FA6NER0 549 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3LB9A6J9 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 MPIG6BO95866 241 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3HP0C7X1 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PSMB6P28072 239 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 DDTP30046 118 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 L1CAMP32004 1257 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 SIRPB2Q5JXA9 342 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OTUD1Q5VV17 481 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3GQ6DHY5 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR8G2PQ6IF36 304 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3CQ6IPX1 549 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 SP8Q8IXZ3 490 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TBC1D3Q8IZP1 549 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 PRSS35Q8N3Z0 413 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR5AP2Q8NGF4 316 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF845Q96IR2 970 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 ALOXE3Q9BYJ1 711 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CUTCQ9NTM9 273 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 A0A1W2PN81 502 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PRAMEF27A3QJZ7 478 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 LIPCP11150 499 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CHRNA7P36544 502 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CLDN20P56880 219 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TMEM115Q12893 351 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 ALKBH1Q13686 389 aaKnown RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 RUNX2Q13950 521 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GPR162Q16538 588 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 MSS51Q4VC12 460 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PRAMEF9Q5VWM5 478 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 WDR5BQ86VZ2 330 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CNTN4Q8IWV2 1026 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NRMQ8IXM6 262 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms