RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ERVPABLB-1P60509 514 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 EEF1DP3Q658K8 133 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OPN5Q6U736 354 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 RHOUQ7L0Q8 258 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 IGFN1Q86VF2 1251 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR4N4Q8N0Y3 316 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 RNF175Q8N4F7 328 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SUMF2Q8NBJ7 301 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR2A12Q8NGT7 310 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 RLN3Q8WXF3 142 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 P2RY11Q96G91 374 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 PKP2Q99959 881 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SDCBP2Q9H190 292 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SMOC2Q9H3U7 446 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TXNRD2Q9NNW7 524 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MAFBQ9Y5Q3 323 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TRABD2BA6NFA1 517 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CDC123O75794 336 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MT-ND6P03923 174 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CALCBP10092 127 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ITGAMP11215 1152 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CTHP32929 405 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CDKN2BP42772 138 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 INCA1Q0VD86 236 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 KIR2DS3Q14952 304 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 LGALSLQ3ZCW2 172 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MIDNQ504T8 468 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR52W1Q6IF63 320 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 BRICD5Q6PL45 260 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MMP21Q8N119 569 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR52B6Q8NGF0 335 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR5D18Q8NGL1 313 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR5H2Q8NGV7 314 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 LILRB4Q8NHJ6 448 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 PIGTQ969N2 578 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MARVELD3Q96A59 401 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MFSD3Q96ES6 412 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 PDLIM5Q96HC4 596 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 KIRREL1Q96J84 757 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 LCORQ96JN0 433 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 FCRL4Q96PJ5 515 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 GPR61Q9BZJ8 451 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 AGO3Q9H9G7 860 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MUC6Q6W4X9 2439 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 G3V3Q6 166 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CA11O75493 328 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MARCKSL1P49006 195 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 AKR1C2P52895 323 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 RAC1P63000 192 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 IL13RA1P78552 427 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SURF2Q15527 256 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 LINC00696Q6ZRV3 163 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZBTB46Q86UZ6 589 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 IQCF2Q8IXL9 164 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35F2Q8IXU6 374 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 GPR137CQ8N3F9 429 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 C3orf56Q8N813 242 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ADPRHL1Q8NDY3 354 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CSNK2A3Q8NEV1 391 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR2D3Q8NGH3 330 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SPPL3Q8TCT6 385 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 NTNG2Q96CW9 530 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SEH1LQ96EE3 360 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 DUS3LQ96G46 650 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 WFIKKN1Q96NZ8 548 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SNRNP25Q9BV90 132 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 BRD7Q9NPI1 651 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ACTR10Q9NZ32 417 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF69Q9UC07 566 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 FLVCR2Q9UPI3 526 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CEP192Q8TEP8 1941 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 YLPM1P49750 1951 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 HAS3O00219 553 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CLDN5O00501 218 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 GALR3O60755 368 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MT-CO3P00414 261 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 MT-ND4P03905 459 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 JUNP05412 331 aaKnown RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OMGP23515 440 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 CLRN1P58418 232 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZP2Q05996 745 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 DLX2Q07687 328 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 C1orf61Q13536 156 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 C9orf50Q5SZB4 431 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TNFAIP8L2Q6P589 184 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-202ENST00000339701 LYSMD2Q8IV50 215 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 DEFB106AQ8N104 65 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF610Q8N9Z0 462 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 OR4F15Q8NGB8 312 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TTC9Q92623 222 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF251Q9BRH9 671 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM185BQ9H7F4 350 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM140Q9NV12 185 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF281Q9Y2X9 895 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 ACOD1A6NK06 481 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 J3KR12 359 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 M0R3H8 397 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 EMC8O43402 210 aa3.05□□□□□ -1.92
CSMD3-202ENST00000339701 SIX3O95343 332 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms