RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 TMPRSS12Q86WS5 348 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 C8orf59Q8N0T1 100 aaPredicted RBP4.37□□□□□ -1.71
MSL1-201ENST00000339569 LNX2Q8N448 690 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 OR1L3Q8NH93 324 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 CCL4L1Q8NHW4 92 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 UBASH3BQ8TF42 649 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 PYDC1Q8WXC3 89 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 PROX1Q92786 737 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 YIPF6Q96EC8 236 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 DOCK9Q9BZ29 2069 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 TCEAL2Q9H3H9 227 aaPredicted RBP4.37□□□□□ -1.71
MSL1-201ENST00000339569 UBQLN4Q9NRR5 601 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 LIN7CQ9NUP9 197 aaKnown RBP4.37□□□□□ -1.71
MSL1-201ENST00000339569 MOKQ9UQ07 419 aa4.37□□□□□ -1.71
MSL1-201ENST00000339569 AHCTF1Q8WYP5 2266 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 TDRD6O60522 2096 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 A0A087WUJ7 227 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 IGHV5-51A0A0C4DH38 117 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 MBD3L4A6NDZ8 208 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 MBD3L3A6NE82 208 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 OR2W5A6NFC9 320 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 OOEPA6NGQ2 149 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FGF17O60258 216 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 GPX5O75715 221 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CEACAM4O75871 244 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 VAMP5O95183 116 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 NCK1P16333 377 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 POLR2CP19387 275 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 HNF1AP20823 631 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FBLP22087 321 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 SLC2A5P22732 501 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 POU1F1P28069 291 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CD96P40200 585 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CBX5P45973 191 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 VBP1P61758 197 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 DCDP81605 110 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 VLDLRP98155 873 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 SKP2Q13309 424 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 RTP5Q14D33 572 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 ULK3Q6PHR2 472 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CLEC9AQ6UXN8 241 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 C8orf86Q6ZUL3 223 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 HDDC2Q7Z4H3 204 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 ANKRD37Q7Z713 158 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 GID4Q8IVV7 300 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 UBQLNLQ8IYU4 475 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 EXD3Q8N9H8 876 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FAM46DQ8NEK8 389 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 OR52N1Q8NH53 320 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 OR51Q1Q8NH59 317 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 ZCCHC10Q8TBK6 192 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 SKA2Q8WVK7 121 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 CYGBQ8WWM9 190 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 DEDD2Q8WXF8 326 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 NSMAFQ92636 917 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CIDECQ96AQ7 238 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 EME1Q96AY2 570 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 TPD52L3Q96J77 140 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 WDR77Q9BQA1 342 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 CCDC3Q9BQI4 270 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 NDC1Q9BTX1 674 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 TAPBPLQ9BX59 468 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 RSPO3Q9BXY4 272 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 UCK2Q9BZX2 261 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FKRPQ9H9S5 495 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FAM60AQ9NP50 221 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 ABI3Q9P2A4 366 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 MGAT4CQ9UBM8 478 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 NDRG2Q9UN36 371 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 LSM2Q9Y333 95 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 RBMX2Q9Y388 322 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 DMRT1Q9Y5R6 373 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 NOX1Q9Y5S8 564 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 FLVCR1Q9Y5Y0 555 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CDH10Q9Y6N8 788 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 KNTC1P50748 2209 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 SNRNP200O75643 2136 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 SPENQ96T58 3664 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 URB1O60287 2271 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 TMEM150CB9EJG8 249 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 UGT2B17O75795 530 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 RLN1P04808 185 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CFIP05156 583 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 HMGN2P05204 90 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 ETFAP13804 333 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CFL1P23528 166 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 RRM2P31350 389 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 THBS4P35443 961 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 CLK3P49761 638 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 PDX1P52945 283 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 SELENOVP59797 346 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 DUSP2Q05923 314 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 RBPJQ06330 500 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 RAB40BQ12829 278 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 EBPQ15125 230 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 ZNF791Q3KP31 576 aaPredicted RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 THOC7Q6I9Y2 204 aaKnown RBP4.36□□□□□ -1.71
MSL1-201ENST00000339569 FAM198BQ6UWH4 519 aa4.36□□□□□ -1.71
MSL1-201ENST00000339569 ZNF836Q6ZNA1 936 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms