RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SUSD5O60279 629 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF806P0C7X5 589 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ARL4DP49703 201 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 EFNB2P52799 333 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 CXADRP78310 365 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 BTG2P78543 158 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SCRN3Q0VDG4 424 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 FAM53BQ14153 422 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 FBXO42Q6P3S6 717 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ATRAIDQ6UW56 229 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ADAMTSL4Q6UY14 1074 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 MARCH3Q86UD3 253 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF485Q8NCK3 441 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF681Q96N22 645 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SERINC2Q96SA4 455 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 HEXA-AS1Q9H8Q6 139 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 A0A0G2JK05 382 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 PRSS38A1L453 326 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 AIPO00170 330 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 CD2P06729 351 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 IL32P24001 234 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 CD34P28906 385 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 RUNX3Q13761 415 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 MEP1BQ16820 701 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ULK3Q6PHR2 472 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SHISA6Q6ZSJ9 500 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF101Q8IZC7 436 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SLC22A18Q96BI1 424 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF75AQ96N20 296 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SPACA5Q96QH8 159 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 MKL2Q9ULH7 1088 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 NGFRP08138 427 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 PPP3CBP16298 524 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 CXCR1P25024 350 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 PEBP1P30086 187 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 DRD3P35462 400 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 EFNB1P98172 346 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 RBMS2Q15434 407 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 GLDNQ6ZMI3 551 aaPredicted RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 PM20D2Q8IYS1 436 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 C12orf45Q8N5I9 185 aaPredicted RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 THAP6Q8TBB0 222 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 KISS1RQ969F8 398 aaPredicted RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
PCDH8-201ENST00000338862 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 SLC7A5P2Q9GIP4 190 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 ANKRD19PQ9H560 264 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 INPP5EQ9NRR6 644 aa12.93□□□□□ -0.34
PCDH8-201ENST00000338862 TRAV8-7A0A075B6U6 113 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 F8W036 122 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 HOXB2P14652 356 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 CBR1P16152 277 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 DLSTP36957 453 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 S100A10P60903 97 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 BLOC1S1P78537 153 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 Q499Y3 187 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 TTLL10Q6ZVT0 673 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF765Q7L2R6 523 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 OR2AK2Q8NG84 335 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 POLMQ9NP87 494 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 PIN1P1O15428 100 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 SLC16A7O60669 478 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 F12P00748 615 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 PI3P19957 117 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 PRKXP51817 358 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 PPP2CBP62714 309 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 PPP2CAP67775 309 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 RAB11BQ15907 218 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 GLYATL3Q5SZD4 288 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 SLC35F3Q8IY50 421 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF416Q9BWM5 594 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 TINAGL1Q9GZM7 467 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 DHDHQ9UQ10 334 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 CLDN4O14493 209 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 ADAM11O75078 769 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 FGF19O95750 216 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 STEAP1BQ6NZ63 245 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 DGAT2L6Q6ZPD8 337 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 ATOH1Q92858 354 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 RAB7BQ96AH8 199 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms