RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 ZFP41Q8N8Y5 198 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZNF485Q8NCK3 441 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 MDS2Q8NDY4 140 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 PROKR2Q8NFJ6 384 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 FDCSPQ8NFU4 85 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 OR6S1Q8NH40 331 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZNF420Q8TAQ5 688 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 THAP4Q8WY91 577 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 CRELD1Q96HD1 420 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 AGAP4Q96P64 663 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 FAM173AQ9BQD7 235 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 EMC6Q9BV81 110 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 MND1Q9BWT6 205 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 OR51E2Q9H255 320 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TXNIPQ9H3M7 391 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RNF167Q9H6Y7 350 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZFP64Q9NPA5 681 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ABI3Q9P2A4 366 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 CORINQ9Y5Q5 1042 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 URB1O60287 2271 aaKnown RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 A0A0J9YW62 118 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 A0A1W2PQL4 384 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 A0A1W2PRG6 482 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TMEM129A0AVI4 362 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 DAPL1A0PJW8 107 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 IRGMA1A4Y4 181 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TVP23AA6NH52 213 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 VGLL3A8MV65 326 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SULT2B1O00204 365 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TNFSF11O14788 317 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 KLK10O43240 276 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SEC14L5O43304 696 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TLX3O43711 291 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 GABARAPO95166 117 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SP1P08047 785 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 PSKH1P11801 424 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZNF182P17025 639 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 PAX7P23759 505 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RPS27P42677 84 aaKnown RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 MAP2K6P52564 334 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RRADP55042 308 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 WNT4P56705 351 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RPS3AP61247 264 aaKnown RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 HSF1Q00613 529 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZNF85Q03923 595 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 FMODQ06828 376 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 MFAP5Q13361 173 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 PON3Q15166 354 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ETFDHQ16134 617 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 EMC4Q5J8M3 183 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RNLSQ5VYX0 342 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 GPR139Q6DWJ6 353 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 NHLRC1Q6VVB1 395 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TMPPEQ6ZT21 453 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 GPAT4Q86UL3 456 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ATCAYQ86WG3 371 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ACBD7Q8N6N7 88 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SCAIQ8N9R8 606 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SYT14Q8NB59 555 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 NDNFQ8TB73 568 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 RAB2BQ8WUD1 216 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SLC25A43Q8WUT9 341 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 SPRYD4Q8WW59 207 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 MIB2Q96AX9 1013 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SFXN2Q96NB2 322 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 UCN2Q96RP3 112 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 PIGQQ9BRB3 760 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ALG12Q9BV10 488 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 ALG8Q9BVK2 526 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SCNM1Q9BWG6 230 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 SRXN1Q9BYN0 137 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 NDEL1Q9GZM8 345 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 TSPAN10Q9H1Z9 355 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 ZNF703Q9H7S9 590 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 CHCHD3Q9NX63 227 aaKnown RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 PTTG2Q9NZH5 202 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 KLHL13Q9P2N7 655 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 BOKQ9UMX3 212 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 COPS3Q9UNS2 423 aa3.71□□□□□ -1.82
MCF2-201ENST00000338585 EXOSC1Q9Y3B2 195 aaKnown RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 SPIN1Q9Y657 262 aaPredicted RBP3.71□□□□□ -1.82
MCF2-201ENST00000338585 APC2O95996 2303 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 IGKV1D-43A0A0B4J1Z2 117 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 LOC100506127A0A0U1RQW1 187 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC22A23A1A5C7 686 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PRSS37A4D1T9 235 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 TRIM64BA6NI03 449 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 PRR32B1ATL7 298 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 E9PI62 339 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NPIPA5E9PKD4 350 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 ZNF701M0R085 212 aaPredicted RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 EIF1AYO14602 144 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 XKRYO14609 159 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NME2P1O60361 137 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 SLC16A7O60669 478 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 NOL3O60936 208 aaKnown RBP3.7□□□□□ -1.82
MCF2-201ENST00000338585 FZD7O75084 574 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 GLCEO94923 617 aa3.7□□□□□ -1.82
MCF2-201ENST00000338585 BCL10O95999 233 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms