RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 EGLN1Q9GZT9 426 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 BANF2Q9H503 90 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ZNF814B7Z6K7 855 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 TOX4O94842 621 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 CCR7P32248 378 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 HNRNPA1L2Q32P51 320 aaKnown RBP10.9□□□□□ -0.66
SHANK2-201ENST00000338508 PLA1AQ53H76 456 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 RNF170Q96K19 258 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 S1PR3Q99500 378 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 BARHL1Q9BZE3 327 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NIPAL2Q9H841 368 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ENPP5Q9UJA9 477 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 HIST1H1TP22492 207 aaPredicted RBP10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ACSM1Q08AH1 577 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ZNF750Q32MQ0 723 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 Q6ZRG5 221 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SLC35F3Q8IY50 421 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 CPXM2Q8N436 756 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 OR1N1Q8NGS0 311 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NMNAT3Q96T66 252 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 PIGQQ9BRB3 760 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SLC46A2Q9BY10 475 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NRSN2Q9GZP1 204 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 VAPAQ9P0L0 249 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ABCD4O14678 606 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 P2RX6O15547 441 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SEMG1P04279 462 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 RFC3P40938 356 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 CDC34P49427 236 aaPredicted RBP10.9□□□□□ -0.66
SHANK2-201ENST00000338508 INHBCP55103 352 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 WDR5P61964 334 aaKnown RBP10.9□□□□□ -0.66
SHANK2-201ENST00000338508 RPE65Q16518 533 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 OR1M1Q8NGA1 313 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 ASB17Q8WXJ9 295 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NTMT1Q9BV86 223 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SLC5A10A0PJK1 596 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NCBP2LA6PVI3 153 aaKnown RBP10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SNCGO76070 127 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 FAM157BP0CG42 384 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 SLC35A1P78382 337 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 FAM109AQ8N4B1 249 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 B3GAT1Q9P2W7 334 aa10.9□□□□□ -0.66
SHANK2-201ENST00000338508 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 KLRC4-KLRK1H3BQV0 150 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 EIF2DP41214 584 aaKnown RBP10.9□□□□□ -0.67
SHANK2-201ENST00000338508 PSMB3P49720 205 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 KCNJ10P78508 379 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 DEFB109BQ30KR1 87 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 PGGHGQ32M88 737 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 OR5B3Q8NH48 314 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 OR10J5Q8NHC4 309 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 OR14A16Q8NHC5 309 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM163Q8TC26 289 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 GDE1Q9NZC3 331 aa10.9□□□□□ -0.67
SHANK2-201ENST00000338508 MRPS2Q9Y399 296 aaKnown RBP10.9□□□□□ -0.67
SHANK2-201ENST00000338508 MED1Q15648 1581 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 LTN1O94822 1766 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 A0A096LPE4 126 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 A0A1W2PPZ6 126 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PRKACBP22694 351 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 FAM78AQ5JUQ0 283 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 LCN8Q6JVE9 175 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TMPRSS11FQ6ZWK6 438 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 MED25Q71SY5 747 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TNFRSF13CQ96RJ3 184 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 GMLQ99445 158 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 MYOGP15173 224 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 NPY4RP50391 375 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PTTG1IPP53801 180 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 RPS27AP62979 156 aaKnown RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 UBA52P62987 128 aaKnown RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PIANPQ8IYJ0 282 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 PRRG2O14669 202 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 GLB1P16278 677 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 CYB561P49447 251 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 HBA1P69905 142 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 WDR31Q8NA23 367 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 APH1AQ96BI3 265 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 EMC6Q9BV81 110 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 TMED7-TICAM2A0A0A6YYA0 188 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 IGHV3-15A0A0B4J1V0 119 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 MEIOCA2RUB1 952 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 BLACEA4D250 179 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF749O43361 778 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 GPR75O95800 540 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-201ENST00000338508 DEFA6Q01524 100 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 DPPA4Q7L190 304 aa10.89□□□□□ -0.67
SHANK2-201ENST00000338508 FAM71CQ8NEG0 241 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms