RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LHX2P50458 406 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DAP3P51398 398 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAC3P60763 192 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAB39AQ14964 217 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NHLRC1Q6VVB1 395 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ADCK1Q86TW2 530 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 WDFY1Q8IWB7 410 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PM20D2Q8IYS1 436 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR10D3Q8NH80 312 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR2V1Q8NHB1 315 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MUL1Q969V5 352 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SYT4Q9H2B2 425 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 KLHL13Q9P2N7 655 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NOX1Q9Y5S8 564 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CEP295Q9C0D2 2601 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 K7EM74 188 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LCKP06239 509 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF43P17038 809 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ENPP1P22413 925 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DCKP27707 260 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PYCR1P32322 319 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PLA2G5P39877 138 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EIF1AXP47813 144 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC25A1P53007 311 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SRYQ05066 204 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LGALS3BPQ08380 585 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TMED1Q13445 227 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 C1DQ13901 141 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF169Q14929 603 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PON3Q15166 354 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 GPR141Q7Z602 305 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RORBQ92753 470 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EMC6Q9BV81 110 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CLEC2DQ9UHP7 191 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RASD1Q9Y272 281 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF99A8MXY4 864 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DCTN6O00399 190 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TFECO14948 347 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DNPH1O43598 174 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PTHP01270 115 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 BIDP55957 195 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TBR1Q16650 682 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR6V1Q8N148 313 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RERGLQ9H628 205 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EXO5Q9H790 373 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 HAO2Q9NYQ3 351 aa13.17□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 A6NIZ1 184 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 GLCEO94923 617 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF708P17019 499 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF24P17028 368 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MYL12AP19105 171 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ETV1P50549 477 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CLDN18P56856 261 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAP1BP61224 184 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAP1AP62834 184 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PDSS1Q5T2R2 415 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 UBE2UQ5VVX9 321 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SYT14Q8NB59 555 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PROKR2Q8NFJ6 384 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR2T4Q8NH00 348 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EXTL1Q92935 676 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF845Q96IR2 970 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SNX18Q96RF0 628 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NUAK2Q9H093 628 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ADGRL4Q9HBW9 690 aa13.16□□□□□ -0.3
CDK5RAP3-201ENST00000338399 VSX1Q9NZR4 365 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms