RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ULBP3Q9BZM4 244 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 GPR55Q9Y2T6 319 aaPredicted RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 CHST2Q9Y4C5 530 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 M0QYG6 137 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 SLC34A2O95436 690 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 TK1P04183 234 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 MTCP1P56278 107 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 DPTQ07507 201 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 ACTBL2Q562R1 376 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 LIX1LQ8IVB5 337 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 HOXC11O43248 304 aaPredicted RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 SIX6O95475 246 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 SLC2A10O95528 541 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 APEHP13798 732 aaKnown RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 BLVRBP30043 206 aaPredicted RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 ACSM1Q08AH1 577 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 FGL2Q14314 439 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 OR4D6Q8NGJ1 314 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 RSC1A1Q92681 617 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 DDOQ99489 341 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 SSX3Q99909 188 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 SEMA6CQ9H3T2 930 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 AKIP1Q9NQ31 210 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 SPHK1Q9NYA1 384 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 NTNG1Q9Y2I2 539 aa12.67□□□□□ -0.38
RTN4-202ENST00000337526 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
RTN4-202ENST00000337526 LALBAP00709 142 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 THBS1P07996 1170 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 PRR35P0CG20 571 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 C17orf67Q0P5P2 114 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 CTF1Q16619 201 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 DHRS4L2Q6PKH6 230 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 ADIPOR2Q86V24 386 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 CMIPQ8IY22 773 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 RADILQ96JH8 1075 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 PLEKHA3Q9HB20 300 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 MRPS28Q9Y2Q9 187 aaKnown RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 P2RY10O00398 339 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 TGM6O95932 706 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 IHHQ14623 411 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 BCL2A1Q16548 175 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 MANEAQ5SRI9 462 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 FAM219BQ5XKK7 198 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 TMEM43Q9BTV4 400 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 BCL2L10Q9HD36 194 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 ZNF225Q9UK10 706 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 MCTS1Q9ULC4 181 aaKnown RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 PRRT4C9JH25 899 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 GABARAPH6UMI1 98 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 LCMT2O60294 686 aaKnown RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 APLNRP35414 380 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 PPT1P50897 306 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 NKX6-1P78426 367 aaPredicted RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 SLC22A24Q8N4F4 322 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 CTRCQ99895 268 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 ENKD1Q9H0I2 346 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 LYRM4Q9HD34 91 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 FGF21Q9NSA1 209 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 TBC1D29Q9UFV1 150 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 CCDC163A0A0D9SF12 145 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 TEX51A0A1B0GUA7 166 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 H3BNC9 293 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 FCGR2AP12318 317 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 CD1EP15812 388 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 HOXA9P31269 272 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 EVX1P49640 407 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 BIDP55957 195 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
RTN4-202ENST00000337526 HEPHL1Q6MZM0 1159 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 SLC6A17Q9H1V8 727 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 ACOXLQ9NUZ1 547 aa12.66□□□□□ -0.38
RTN4-202ENST00000337526 LOC100289279A0A1B0GTE1 492 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 RAB4BP61018 213 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 FOXK1P85037 733 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 FABP5Q01469 135 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 CDC20Q12834 499 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ZNF77Q15935 545 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 FGGYQ96C11 551 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms