RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 UBQLNLQ8IYU4 475 aa20.9■□□□□ 0.94
CLPTM1-201ENST00000337392 UBASH3BQ8TF42 649 aa20.9■□□□□ 0.94
CLPTM1-201ENST00000337392 THEM6Q8WUY1 208 aa20.9■□□□□ 0.94
CLPTM1-201ENST00000337392 H3BML4 177 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 OGG1O15527 345 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 MPZL1O95297 269 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 ASAH1Q13510 395 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 NR0B2Q15466 257 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 ACKR1Q16570 336 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 NDUFA5Q16718 116 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 LCN1P1Q5VSP4 162 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 LIPNQ5VXI9 398 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 MDGA2Q7Z553 956 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 DNAAF1Q8NEP3 725 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 GFI1Q99684 422 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 WDR77Q9BQA1 342 aaPredicted RBP20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 ALOX12BO75342 701 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 BIKQ13323 160 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 BPHLQ86WA6 291 aaPredicted RBP20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 TIGD4Q8IY51 512 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 C19orf18Q8NEA5 215 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 ZNF417Q8TAU3 575 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 NECAB3Q96P71 396 aaPredicted RBP20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 ZNF587Q96SQ5 575 aaPredicted RBP20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 HDHD2Q9H0R4 259 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 BRD7Q9NPI1 651 aa20.89■□□□□ 0.93
CLPTM1-201ENST00000337392 TAS2R43P59537 309 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 ACTA2P62736 377 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 ACTG2P63267 376 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 RSBN1Q5VWQ0 802 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 PRSS45Q7RTY3 260 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 RAB43Q86YS6 212 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 YIPF7Q8N8F6 280 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 ANKRD10Q9NXR5 420 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 TAS2R10Q9NYW0 307 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 NUFIP1Q9UHK0 495 aaKnown RBP20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 EEF1E1O43324 174 aaKnown RBP20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 PGCP20142 388 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 PNLIPRP2P54317 469 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 CBFBQ13951 182 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 MZT2AQ6P582 158 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 SERPINA12Q8IW75 414 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 PLPP5Q8NEB5 264 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 NFAM1Q8NET5 270 aaPredicted RBP20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 ZFP3Q96NJ6 502 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 SLC22A4Q9H015 551 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 RARRES3Q9UL19 164 aa20.88■□□□□ 0.93
CLPTM1-201ENST00000337392 TO15178 435 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 P2RX1P51575 399 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 DCAF7P61962 342 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 SETD6Q8TBK2 473 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 METTL21AQ8WXB1 218 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 COL5A1P20908 1838 aaPredicted RBP20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 PTHLHP12272 177 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 AGFG1P52594 562 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 IFITM2Q01629 132 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 LRRN1Q6UXK5 716 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 ENKURQ8TC29 256 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 GTPBP2Q9BX10 602 aaKnown RBP20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 FRRS1LQ9P0K9 344 aa20.87■□□□□ 0.93
CLPTM1-201ENST00000337392 SPENQ96T58 3664 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 SNTA1Q13424 505 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 C1orf140Q5VVS0 124 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 KMT5CQ86Y97 462 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 SYS1Q8N2H4 156 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 CHAC2Q8WUX2 184 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 UPRTQ96BW1 309 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 GFM1Q96RP9 751 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 SPSB2Q99619 263 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 DMXL1Q9Y485 3027 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 TRAV36DV7A0A075B6V5 113 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 CD3GP09693 182 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 EPXP11678 715 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 CCL4P13236 92 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 CTLA4P16410 223 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 EMP2P54851 167 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 FMODQ06828 376 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 ZNF684Q5T5D7 378 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 RPL22L1Q6P5R6 122 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 OR10G3Q8NGC4 313 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 IFI44Q8TCB0 444 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 LIPHQ8WWY8 451 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 FYTTD1Q96QD9 318 aaKnown RBP20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 CRB3Q9BUF7 120 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 LAMP5Q9UJQ1 280 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 GTF2A1LQ9UNN4 478 aa20.86■□□□□ 0.93
CLPTM1-201ENST00000337392 SLC16A7O60669 478 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 FZD7O75084 574 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 UPK3AO75631 287 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 OR2J2O76002 312 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 DCDP81605 110 aaKnown RBP20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 INSM1Q01101 510 aaPredicted RBP20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 KRT74Q7RTS7 529 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 CARFQ8N187 725 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 MS4A15Q8N5U1 240 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 CYSLTR2Q9NS75 346 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 SRPK3Q9UPE1 567 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 BOLA1Q9Y3E2 137 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 KNTC1P50748 2209 aa20.85■□□□□ 0.93
CLPTM1-201ENST00000337392 URB1O60287 2271 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms