RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 PLA2G12AQ9BZM1 189 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 IL20Q9NYY1 176 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 JKAMPQ9P055 326 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 POFUT2Q9Y2G5 429 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 ADAM18Q9Y3Q7 739 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 IER3IP1Q9Y5U9 82 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 DIDO1Q9BTC0 2240 aaKnown RBP12.46□□□□□ -0.42
APOBEC3B-202ENST00000335760 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 A8MXE2 369 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 H3BN98 237 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 PPP1R3DO95685 299 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 OSMP13725 252 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 POU1F1P28069 291 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 ACVR1BP36896 505 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 ASCL1P50553 236 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 RPS6KA3P51812 740 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 LGALS3BPQ08380 585 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 CLEC12AQ5QGZ9 265 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 ARMC4Q5T2S8 1044 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 TSPO2Q5TGU0 170 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF474Q6S9Z5 364 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 TMEM123Q8N131 208 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR52L1Q8NGH7 329 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR8D4Q8NGM9 314 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 EME1Q96AY2 570 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 GPX7Q96SL4 187 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 RBM4BQ9BQ04 359 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 C9orf16Q9BUW7 83 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 RBM4Q9BWF3 364 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 TSSK6Q9BXA6 273 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 OSBPL10Q9BXB5 764 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLCO5A1Q9H2Y9 848 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 NRIP3Q9NQ35 241 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 GRHPRQ9UBQ7 328 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
APOBEC3B-202ENST00000335760 SOCS2O14508 198 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 EI24O14681 340 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 MITFO75030 526 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 UPK3AO75631 287 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 TRMUO75648 421 aaKnown RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 KRT33AO76009 404 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 ACADSP16219 412 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 IGFBP5P24593 272 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 PPP2R2BQ00005 443 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 RUNX1T1Q06455 604 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 DAG1Q14118 895 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 TRIP10Q15642 601 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC36A3Q495N2 470 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 KDM4DQ6B0I6 523 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 HDDC2Q7Z4H3 204 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 CBR4Q8N4T8 237 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 POMGNT2Q8NAT1 580 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR6N1Q8NGY5 312 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 TEX47Q8TBZ9 253 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF566Q969W8 418 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC25A44Q96H78 314 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 Q96M85 177 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF570Q96NI8 536 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 RBM24Q9BX46 236 aaKnown RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 PCNX1Q96RV3 2341 aa12.44□□□□□ -0.42
APOBEC3B-202ENST00000335760 TEX13CA0A0J9YWL9 993 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 A6NIZ1 184 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR6C65A6NJZ3 312 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ARHGEF9O43307 516 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 IGHG1P01857 330 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 APEHP13798 732 aaKnown RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 SDHAP31040 664 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 CSNK1A1P48729 337 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 CLRN1P58418 232 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 RAP1BP61224 184 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 RAP1AP62834 184 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 FAPQ12884 760 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 FAM205BPQ63HN1 556 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 LPCAT4Q643R3 524 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZBTB49Q6ZSB9 765 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 PARP8Q8N3A8 854 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 GPR137CQ8N3F9 429 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 HDAC2Q92769 488 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms