RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OR8G2PQ6IF36 304 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 S100A7AQ86SG5 101 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 LRRTM1Q86UE6 522 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 WDR5BQ86VZ2 330 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 ZFP62Q8NB50 900 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-201ENST00000334504 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 NUDT22Q9BRQ3 303 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 STARD5Q9NSY2 213 aa9.1□□□□□ -0.95
COL4A6-201ENST00000334504 OR5H14A6NHG9 310 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 RFPL4AA6NLU0 287 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 OR5K4A6NMS3 321 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 RFPL4AL1F8VTS6 287 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SLC16A6O15403 523 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 APBB3O95704 486 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SRMP19623 302 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 HTR1FP30939 366 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 AKR1C3P42330 323 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 GP2P55259 537 aaKnown RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 CHRNEQ04844 493 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 IKZF1Q13422 519 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 CLEC12BQ2HXU8 276 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SOWAHCQ53LP3 525 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 WBP2NLQ6ICG8 309 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM43Q9BTV4 400 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 DUOX1Q9NRD9 1551 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 AQP7O14520 342 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 OR8U8P0C7N1 319 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 EDN3P14138 238 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 FABP4P15090 132 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SPNP16150 400 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ACHEP22303 614 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 PTAFRP25105 342 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 GABRA2P47869 451 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ACOT4Q8N9L9 421 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ACVR1CQ8NER5 493 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 BADQ92934 168 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ZFYVE21Q9BQ24 234 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SLC25A21Q9BQT8 299 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ALG12Q9BV10 488 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 GDF2Q9UK05 429 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ROBO1Q9Y6N7 1651 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 A0A087WV62 115 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 A0A0G2JLL6 359 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 MOGAT2Q3SYC2 334 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ACOT7LQ6ZUV0 252 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 PRRT2Q7Z6L0 340 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF761Q86XN6 746 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 L3MBTL4Q8NA19 623 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ZNRF4Q8WWF5 429 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 PGAP3Q96FM1 320 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 VN1R3Q9BXE9 311 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ISYNA1Q9NPH2 558 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 PRSS21Q9Y6M0 314 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 FAM155AB1AL88 458 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 P2RY10O00398 339 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 DUX1O43812 170 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 RFX2P48378 723 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ARL16Q0P5N6 197 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 CDC20Q12834 499 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 SLC35G1Q2M3R5 365 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 RPUSD3Q6P087 351 aaKnown RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 LANCL3Q6ZV70 420 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 OR4F5Q8NH21 305 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 UBE2FQ969M7 185 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF583Q96ND8 569 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 OR4F4Q96R69 305 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 TPSD1Q9BZJ3 242 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 NECAP2Q9NVZ3 263 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 MCRIP1C9JLW8 97 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 TAAR5O14804 337 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 RAB5AP20339 215 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 LINC00299Q6ZSB3 139 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 CLEC1AQ8NC01 280 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 KCNG3Q8TAE7 436 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 UBL7Q96S82 380 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-201ENST00000334504 GAREM1Q9H706 876 aa9.09□□□□□ -0.95
COL4A6-201ENST00000334504 MN1Q10571 1320 aaPredicted RBP9.09□□□□□ -0.96
COL4A6-201ENST00000334504 RAB27BO00194 218 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 STC2O76061 302 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 LGI1O95970 557 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 ZP3P21754 424 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 ARNTP27540 789 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 HOXA11P31270 313 aaPredicted RBP9.09□□□□□ -0.96
COL4A6-201ENST00000334504 TGFBR1P36897 503 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 UBE2MP61081 183 aaKnown RBP9.09□□□□□ -0.96
COL4A6-201ENST00000334504 DGCR2P98153 550 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 PMPCAQ10713 525 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 CLPPQ16740 277 aaPredicted RBP9.09□□□□□ -0.96
COL4A6-201ENST00000334504 PRSS42Q7Z5A4 293 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 OR5B3Q8NH48 314 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 TNFRSF13CQ96RJ3 184 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 CABLES2Q9BTV7 478 aa9.09□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF727A8MUV8 499 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms