RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PSMD4P55036 377 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 RPS27AP62979 156 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 UBA52P62987 128 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 IL10RAQ13651 578 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 GAS6Q14393 721 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 DEFB134Q4QY38 66 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 FAM220AQ7Z4H9 259 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 COMMD9Q9P000 198 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 IKZF2Q9UKS7 526 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF860A6NHJ4 632 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 PAK4O96013 591 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 FBXO45P0C2W1 286 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 CALCBP10092 127 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 MGMTP16455 207 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 CNR1P21554 472 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 MPGP29372 298 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 GABRA3P34903 492 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 CDK3Q00526 305 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 MLF2Q15773 248 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 CSRP2Q16527 193 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 UNQ9370/PRO34162Q6UXP9 181 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 ZNRF4Q8WWF5 429 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF75AQ96N20 296 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 SPHK1Q9NYA1 384 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 KCNE5Q9UJ90 142 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 ERVK-19Q9WJR5 959 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 MTCL1Q9Y4B5 1905 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 H7C417 338 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 NDUFB2O95178 105 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 CD3DP04234 171 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF888P0CJ79 500 aaPredicted RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 DDX6P26196 483 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 HSD17B7P56937 341 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 UBE2IP63279 158 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 LIN54Q6MZP7 749 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 SLC35F3Q8IY50 421 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF511Q8NB15 262 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 SLC25A28Q96A46 364 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MTFP1Q9UDX5 166 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 SCN2AQ99250 2005 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 TMEM272A0A1B0GTI8 110 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR14I1A6ND48 311 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MCIDASD6RGH6 385 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 CSF1P09603 554 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 DIO1P49895 249 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR2L13Q8N349 312 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 C12orf45Q8N5I9 185 aaPredicted RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR2L3Q8NG85 312 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR51D1Q8NGF3 324 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 SEC22AQ96IW7 307 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MNTQ99583 582 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 UTP23Q9BRU9 249 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ADAT1Q9BUB4 502 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF350Q9GZX5 532 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 APMAPQ9HDC9 416 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ASF1BQ9NVP2 202 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MDC1Q14676 2089 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 CTNSO60931 367 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 AKAIN1P0CW23 69 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 AGTR1P30556 359 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 TLX1P31314 330 aaPredicted RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 TANGO2Q6ICL3 276 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR52E1Q8NGJ3 308 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 OR14A16Q8NHC5 309 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 WNT2BQ93097 391 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ADAD1Q96M93 576 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 MRI1Q9BV20 369 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 C14orf105Q9NVL8 296 aa12.54□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
SYNE3-201ENST00000334258 A0A1B0GTH9 108 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 TO15178 435 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 KCNAB1Q14722 419 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF77Q15935 545 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 Q499Y3 187 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 RAB12Q6IQ22 244 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF676Q8N7Q3 588 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 RGP1Q92546 391 aaPredicted RBP12.53□□□□□ -0.4
SYNE3-201ENST00000334258 NSMAFQ92636 917 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 Q96M85 177 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms